Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493228 |
| gene name | LOC106583273 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 57468753 ~ 57474567 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110493228 | False | 627 | mRNA | 0.39 | 4 | 57468753 | 57474567 |
| TU1678182 | True | 228 | lncRNA | 0.39 | 1 | 57472569 | 57472796 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tegt | LOC100196653 | coding | upstream | 139026 | 57305804 ~ 57329727 (+) |
| LOC110494190 | LOC106565431 | coding | upstream | 164202 | 57275277 ~ 57304551 (+) |
| LOC110494189 | LOC106565429 | coding | upstream | 194752 | 57238260 ~ 57274001 (+) |
| nramp-alpha | nramp-alpha | coding | upstream | 243067 | 57176451 ~ 57225686 (+) |
| nelfcd | nelfd | coding | upstream | 357191 | 57105818 ~ 57111562 (+) |
| LOC110494206 | LOC108254821 | coding | downstream | 23738 | 57498305 ~ 57548178 (+) |
| LOC110494197 | LOC106565496 | coding | downstream | 181382 | 57655949 ~ 57665568 (+) |
| LOC110494203 | LOC106565438 | coding | downstream | 209278 | 57683845 ~ 57688188 (+) |
| LOC110494205 | LOC106565438 | coding | downstream | 219609 | 57694176 ~ 57697563 (+) |
| LOC110494199 | LOC106565440 | coding | downstream | 230853 | 57705420 ~ 57712033 (+) |
| G1467200 | NA | non-coding | upstream | 4169 | 57464300 ~ 57464584 (+) |
| G1467198 | NA | non-coding | upstream | 5570 | 57462979 ~ 57463183 (+) |
| G1467180 | NA | non-coding | upstream | 27089 | 57441450 ~ 57441664 (+) |
| G1467170 | NA | non-coding | upstream | 39619 | 57428489 ~ 57429134 (+) |
| G1467138 | NA | non-coding | upstream | 86355 | 57382170 ~ 57382398 (+) |
| G1467159 | LOC106565433 | non-coding | downstream | 4230 | 57478797 ~ 57554480 (+) |
| G1467307 | NA | non-coding | downstream | 166000 | 57640567 ~ 57640839 (+) |
| G1467308 | NA | non-coding | downstream | 166682 | 57641249 ~ 57641480 (+) |
| G1467315 | NA | non-coding | downstream | 174646 | 57649213 ~ 57649433 (+) |
| G1467031 | NA | other | upstream | 318410 | 57149303 ~ 57150343 (+) |
| G1467030 | NA | other | upstream | 321012 | 57146488 ~ 57147741 (+) |
| G1467020 | NA | other | upstream | 349867 | 57117702 ~ 57118886 (+) |
| LOC110494160 | LOC105017078 | other | upstream | 886032 | 56575737 ~ 56584088 (+) |
| G1466224 | gem | other | upstream | 1247807 | 56219242 ~ 56220946 (+) |
| G1467219 | NA | other | downstream | 115298 | 57589865 ~ 57614300 (+) |
| G1469076 | NA | other | downstream | 1032730 | 58507297 ~ 58507885 (+) |
| G1470607 | NA | other | downstream | 2627325 | 60101892 ~ 60104007 (+) |
| G1467206 | NA | non-coding | downstream | 292 | 57473088 ~ 57473322 (+) |
