Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940480 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 57903188 ~ 57918719 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037023.1 | True | 286 | mRNA | 0.50 | 3 | 57903188 | 57918719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494208 | LOC106565442 | coding | upstream | 118197 | 57760679 ~ 57784991 (+) |
| LOC110494196 | timeless | coding | upstream | 145458 | 57723671 ~ 57757730 (+) |
| LOC110494199 | LOC106565440 | coding | upstream | 191155 | 57705420 ~ 57712033 (+) |
| LOC110494205 | LOC106565438 | coding | upstream | 205625 | 57694176 ~ 57697563 (+) |
| LOC110494203 | LOC106565438 | coding | upstream | 215000 | 57683845 ~ 57688188 (+) |
| LOC110494214 | LOC106565448 | coding | downstream | 22184 | 57940903 ~ 57949816 (+) |
| LOC110494215 | LOC106565449 | coding | downstream | 62433 | 57981152 ~ 58034780 (+) |
| LOC110494218 | LOC106565452 | coding | downstream | 151346 | 58070065 ~ 58128942 (+) |
| LOC110494220 | LOC106583293 | coding | downstream | 278363 | 58135834 ~ 58249425 (+) |
| LOC110494225 | NA | coding | downstream | 387040 | 58305759 ~ 58309020 (+) |
| G1468278 | NA | non-coding | upstream | 4428 | 57898424 ~ 57898760 (+) |
| G1468273 | NA | non-coding | upstream | 10913 | 57892058 ~ 57892275 (+) |
| G1468270 | NA | non-coding | upstream | 14639 | 57888301 ~ 57888549 (+) |
| G1468256 | NA | non-coding | upstream | 46715 | 57856170 ~ 57856473 (+) |
| G1468200 | NA | non-coding | upstream | 83278 | 57770578 ~ 57819910 (+) |
| G1468334 | NA | non-coding | downstream | 70530 | 57989249 ~ 57989457 (+) |
| G1468336 | NA | non-coding | downstream | 73688 | 57992407 ~ 57992659 (+) |
| G1468343 | NA | non-coding | downstream | 87429 | 58006148 ~ 58006661 (+) |
| G1468403 | NA | non-coding | downstream | 212337 | 58131056 ~ 58138441 (+) |
| G1467219 | NA | other | upstream | 288888 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 355010 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 419599 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 752845 | 57149303 ~ 57150343 (+) |
| G1467030 | NA | other | upstream | 755447 | 57146488 ~ 57147741 (+) |
| G1469076 | NA | other | downstream | 588578 | 58507297 ~ 58507885 (+) |
| G1470607 | NA | other | downstream | 2183173 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 3053759 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 3637600 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 4779784 | 62698503 ~ 62698815 (+) |
