LOC118940483


Basic Information

Item Value
gene id LOC118940483
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 58969947 ~ 58972451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950327.1
AAAGCCATACAGTACAGAGAAGTCCAGAGTCCACATGTTATTTACTGTGATTCACCTCTTTCTTCAAGCCCATACATATACCTGCTTCTCCTACAGTACgctgcatctctccctctatctctcccgaGATTCCTTCCTGTGGGCTCTGAATAGGCAGACTGTCGATGACTTAGCAGTGGAAGACTGATTGAGGCGTCATGCAGAGGCTTTCTGATGTGAGCTGACCGGAGACAGAACCATCCAGAGAGTTCAGACCCAGACGGCCACCACTGTCAGACAGACATAGCAGGAGtcctggggagagacagagagcccgGCGGCTAGCTGGATGCTAAATCAATAGCATCGCAAACATCAACAGAGGGGGGCTGATGTCTATGTTCTCTCCTTTCTTTGGAGAGACTAGGACAAAGGTAGAGCTGATTGGCAGGACGAGAAAGGATTGATTCAAATTGTGGGAGACCTCAATCACGTGACTGGTAACAGTCCCTCATCAGTCGTCTTTCATTTTTGGAAAGGTAAACACTTCAGAAGAAAAAAGAACGACACACTTTTCTACTGTGAGTTTCTGGACTATGGAGAGGAAAGTACTGAGCGAGACAAACCCATCGAATCCTAACTGACAGGAGGGCAACTTCAGAGTGGTTATGGTCAGAAGAATTAACTTTGAGAACCTATGTAATGTCAAATCTGCTGAATGTTCCTGTTGATGGCACACCTTAGTGTTATCGACTCTCCGTTTCAATAATAATTCCCACACGCTTTGTTATCAGTGGCTAGTTGATCAGTCATAATCAGAAGCCTAGTTTTTACAGCAGGTAGATATCGACCCATGGGAGTGTCATCTTGCTGCTAGGATTTTGCTGCTAGGATTTTTTCTCATCAGTCATCACTGCTTCACTGTATCTAGGCTCAGTGTAAGGACTAAGGAGTAGCCCCTTTAAGGctggtctgtctgtcctctccatgGCGGATAATGGATCTGTGTGGAGGAATGACAGTGGTTCTGGTGATGAGGAGACTGGGGTCGGCAGTGTGGAGCTGGTCCTGGTTCTAGTGATGGATGTCCTGATCCTGGTGCTGGGTGTGACGGGGCACTCCCTGGTGATGGTCATCCTGTGTGGTCGTCGAAGAAGAAGGGCAGGTCCGGGGGGTCAACACAACCAGGGGAACctaacagggacagggacagacaccCTCCTGCTGGCCCTGAGTGCGGccgacctcctcctcctctccatgctGCCCTTCCACACCGTCGCCATAGCGATGCAGCACTGGCCCTTCGGGGACTTCCTGTGTCGGCTGGTAAGCTTCCTGGGTGCCGCTTGCTCCTCGGCTAGTGCCTTCACACTGGCCGCCCTGGCCGTGACGCGATATCTGACCGTGGTGGAGCCAACCCAGGCCTACCGCCTTCTTACTCCTCGCCGCGTGGCGCTGACCTCCGCTGCTCTCTGGCTTCCTGCTTGTGCCCTGGCTGCCCCACAGCTGGCCTTCCGCTCCGTGGGTGACGGGCGCATCTCCCCCGATGGCCTGGCCTGCTTCAACTTCCTGTCGCACAATGGCCAGCTGGCCTATGGAGCCTGCCAATTCCTGCTGTCCTTCGCCCTGCCACTGGGCGTCATCGCTGTGGCCTACAGCGGGATCTACTTGTTCCTGTGGCGGAGTTGTAGGGACAGCCGAGCGCCCCAGGTGGAGCGATACCAACGGAAGGTGACCCAGACATCGGCCCTGCTGGTGCTAGCCTTTACCCTGTGCtggttgccctcctacggcctgaCCTTTGCCCTCCTGGGGGGAGGCAGCCATGGGGCCACGGGGTCATCACCGCGCTTCGGGCCCTTCAGCGTGTTCGCCCGCATCACGGCCACCTCCTCTACCGTGGCCAACCCCATCCTCTACGTTCTCATGTCCCAGAAGTTCAGACAGGACCTGCTGGAGCTGGGTGCCAGGGGTGGTGCCAGGGGTGGGGGTCAGTAACCGTGACAACAGACAACTATACAAGACTGGTGGACATGTCTCTAAATCTAAGGTTAAACTGTGTGTCCATGACAAACTGGATGTGGGCTGGATCTGTTGTCTGAGAGCTTGTGGGAAGAACTAAAATAAGTGTCATAATAACAACTCTACGGGACTAAACTACAAAACCATTTCTACCCAAATCTCACTGCTACTCCAGTACACAACTATCACACTAAGCTGTGGTACAAAGCTCGAGCTCCAAGGTTCAATTGAGGGACAGCACTTGAAGTAAAAAGCCTCCCCACTGTGAGACAACAGTCTAAAAGGAGGATCTGAACACTGAGAATCAAAGGCCTCTGTCTAGAGGGCCTCATGGGACATGGCAAAGAACATAGACATCTGGGAGAAATACATTTAtgcttgtaaaaaaaacaaaaacaagagaaAGCTTTAAAGGATGTGAGCTCTTTTACACATTAATACCATTCTGTAGCGATTGTTGTTTCTTTCTGCGATGTTCTTCTGAGATAAAGATAATGAAGG

Function

NR:

description
delta-type opioid receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950327.1 True 2505 mRNA 0.52 1 58969947 58972451
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110494237 LOC106565464 coding downstream 183471 58728304 ~ 58786476 (-)
LOC110494234 LOC106565462 coding downstream 327704 58575443 ~ 58642243 (-)
LOC118936430 hoxc13ba coding downstream 467569 58498322 ~ 58502378 (-)
LOC110494233 hoxc12ba coding downstream 481002 58485608 ~ 58488945 (-)
LOC110494232 LOC106565461 coding downstream 497188 58469423 ~ 58472759 (-)
LOC110494241 NA coding upstream 40471 59012922 ~ 59028401 (-)
esyt1b LOC106565469 coding upstream 56092 59028543 ~ 59068426 (-)
LOC110494242 zc3h10 coding upstream 99498 59071949 ~ 59077606 (-)
LOC110494243 LOC106565512 coding upstream 114888 59087339 ~ 59092481 (-)
LOC118940103 NA coding upstream 121138 59093589 ~ 59095054 (-)
G1469528 NA non-coding downstream 253180 58715866 ~ 58716767 (-)
G1469518 NA non-coding downstream 262762 58705716 ~ 58707185 (-)
G1469486 NA non-coding downstream 326481 58643138 ~ 58643466 (-)
G1469112 NA non-coding downstream 435193 58534489 ~ 58534754 (-)
G1469715 NA non-coding upstream 96881 59069332 ~ 59069904 (-)
G1469720 NA non-coding upstream 110124 59082575 ~ 59082835 (-)
G1469723 NA non-coding upstream 113384 59085835 ~ 59086482 (-)
hig1a hig1a other downstream 1737240 57229440 ~ 57233433 (-)
elmo2 LOC106565399 other downstream 2469622 56494856 ~ 56530610 (-)
dnai1.2 dnai1 other downstream 2802610 56130667 ~ 56167366 (-)
LOC110494137 LOC106565384 other downstream 2999233 55954473 ~ 55971001 (-)
G1464954 NA other downstream 4242052 54726796 ~ 54727895 (-)
G1470802 NA other upstream 702090 59674541 ~ 59676694 (-)
LOC110494253 LOC106565590 other upstream 1018524 59990975 ~ 59999740 (-)
LOC110494257 LOC106565586 other upstream 1134218 60104033 ~ 60110249 (-)
G1471219 srgap3 other upstream 1403295 60375633 ~ 60376864 (-)
G1471564 NA other upstream 1665729 60638180 ~ 60639335 (-)

Expression

LOC118940483 Expression in all Baseline Samples

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LOC118940483 Expression in each Bioproject

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LOC118940483 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network