Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940562 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 59517580 ~ 59517708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118940562 | True | 129 | mRNA | 0.37 | 1 | 59517580 | 59517708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494249 | LOC106565477 | coding | upstream | 52247 | 59461314 ~ 59465333 (+) |
| LOC110494246 | LOC106565476 | coding | upstream | 79555 | 59282799 ~ 59438025 (+) |
| LOC110494244 | NA | coding | upstream | 251088 | 59258342 ~ 59266492 (+) |
| LOC100136832 | lrrn1 | coding | upstream | 272474 | 59210677 ~ 59245106 (+) |
| LOC110494239 | LOC106565466 | coding | upstream | 506501 | 58832894 ~ 59011079 (+) |
| LOC118940599 | NA | coding | downstream | 1130 | 59518838 ~ 59518979 (+) |
| LOC118940610 | NA | coding | downstream | 2401 | 59520109 ~ 59520250 (+) |
| LOC118940552 | NA | coding | downstream | 3677 | 59521385 ~ 59521526 (+) |
| LOC118940621 | NA | coding | downstream | 4949 | 59522657 ~ 59522798 (+) |
| LOC118940632 | NA | coding | downstream | 6221 | 59523929 ~ 59524070 (+) |
| G1470290 | NA | non-coding | upstream | 11243 | 59506034 ~ 59506337 (+) |
| G1470277 | NA | non-coding | upstream | 21454 | 59495827 ~ 59496126 (+) |
| G1469990 | NA | non-coding | upstream | 66398 | 59450762 ~ 59451182 (+) |
| G1469871 | NA | non-coding | upstream | 111787 | 59405174 ~ 59405793 (+) |
| LOC118940527 | NA | non-coding | downstream | 95148 | 59612856 ~ 59613886 (+) |
| G1470301 | NA | non-coding | downstream | 96357 | 59614065 ~ 59618582 (+) |
| G1470331 | NA | non-coding | downstream | 121498 | 59639206 ~ 59639439 (+) |
| G1470335 | NA | non-coding | downstream | 125527 | 59643235 ~ 59643831 (+) |
| G1470341 | NA | non-coding | downstream | 130032 | 59647740 ~ 59647996 (+) |
| G1469076 | NA | other | upstream | 1009695 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 1903280 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 1969402 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 2033991 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 2367237 | 57149303 ~ 57150343 (+) |
| G1470607 | NA | other | downstream | 584184 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 1454770 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 2038611 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 3180795 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 3192631 | 62710339 ~ 62711136 (+) |
