LOC118940599


Basic Information

Item Value
gene id LOC118940599
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59518838 ~ 59518979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037187.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037187.1 True 142 mRNA 0.43 1 59518838 59518979

Neighbor

gene id symbol gene type direction distance location
LOC118940562 NA coding upstream 1130 59517580 ~ 59517708 (+)
LOC110494249 LOC106565477 coding upstream 53505 59461314 ~ 59465333 (+)
LOC110494246 LOC106565476 coding upstream 80813 59282799 ~ 59438025 (+)
LOC110494244 NA coding upstream 252346 59258342 ~ 59266492 (+)
LOC100136832 lrrn1 coding upstream 273732 59210677 ~ 59245106 (+)
LOC118940610 NA coding downstream 1130 59520109 ~ 59520250 (+)
LOC118940552 NA coding downstream 2406 59521385 ~ 59521526 (+)
LOC118940621 NA coding downstream 3678 59522657 ~ 59522798 (+)
LOC118940632 NA coding downstream 4950 59523929 ~ 59524070 (+)
LOC118940643 NA coding downstream 6222 59525201 ~ 59525342 (+)
G1470290 NA non-coding upstream 12501 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 22712 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 67656 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 113045 59405174 ~ 59405793 (+)
LOC118940527 NA non-coding downstream 93877 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 95086 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 120227 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 124256 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 128761 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1010953 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1904538 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1970660 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2035249 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2368495 57149303 ~ 57150343 (+)
G1470607 NA other downstream 582913 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1453499 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2037340 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3179524 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3191360 62710339 ~ 62711136 (+)

Expression


Co-expression Network