LOC118940552


Basic Information

Item Value
gene id LOC118940552
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59521385 ~ 59521526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037147.1
gttctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcagtttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037147.1 True 142 mRNA 0.44 1 59521385 59521526

Neighbor

gene id symbol gene type direction distance location
LOC118940610 NA coding upstream 1135 59520109 ~ 59520250 (+)
LOC118940599 NA coding upstream 2406 59518838 ~ 59518979 (+)
LOC118940562 NA coding upstream 3677 59517580 ~ 59517708 (+)
LOC110494249 LOC106565477 coding upstream 56052 59461314 ~ 59465333 (+)
LOC110494246 LOC106565476 coding upstream 83360 59282799 ~ 59438025 (+)
LOC118940621 NA coding downstream 1131 59522657 ~ 59522798 (+)
LOC118940632 NA coding downstream 2403 59523929 ~ 59524070 (+)
LOC118940643 NA coding downstream 3675 59525201 ~ 59525342 (+)
LOC118940654 NA coding downstream 4947 59526473 ~ 59526614 (+)
LOC118940537 NA coding downstream 6219 59527745 ~ 59527886 (+)
G1470290 NA non-coding upstream 15048 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 25259 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 70203 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 115592 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 256856 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 91330 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 92539 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 117680 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 121709 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 126214 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1013500 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1907085 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1973207 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2037796 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2371042 57149303 ~ 57150343 (+)
G1470607 NA other downstream 580366 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1450952 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2034793 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3176977 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3188813 62710339 ~ 62711136 (+)

Expression


Co-expression Network