LOC118940538


Basic Information

Item Value
gene id LOC118940538
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59529017 ~ 59529158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037134.1
gttctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037134.1 True 142 mRNA 0.44 1 59529017 59529158

Neighbor

gene id symbol gene type direction distance location
LOC118940537 NA coding upstream 1131 59527745 ~ 59527886 (+)
LOC118940654 NA coding upstream 2403 59526473 ~ 59526614 (+)
LOC118940643 NA coding upstream 3675 59525201 ~ 59525342 (+)
LOC118940632 NA coding upstream 4947 59523929 ~ 59524070 (+)
LOC118940621 NA coding upstream 6219 59522657 ~ 59522798 (+)
LOC118940665 NA coding downstream 1131 59530289 ~ 59530430 (+)
LOC118940539 NA coding downstream 2406 59531564 ~ 59531705 (+)
LOC118940543 NA coding downstream 3678 59532836 ~ 59532977 (+)
LOC118940676 NA coding downstream 5217 59534375 ~ 59534516 (+)
LOC118940686 NA coding downstream 6756 59535914 ~ 59536055 (+)
G1470290 NA non-coding upstream 22680 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 32891 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 77835 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 123224 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 264488 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 83698 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 84907 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 110048 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 114077 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 118582 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1021132 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1914717 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1980839 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2045428 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2378674 57149303 ~ 57150343 (+)
G1470607 NA other downstream 572734 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1443320 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2027161 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3169345 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3181181 62710339 ~ 62711136 (+)

Expression


Co-expression Network