LOC118940543


Basic Information

Item Value
gene id LOC118940543
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59532836 ~ 59532977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037139.1
attctttcgcagaggcgaaatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037139.1 True 142 mRNA 0.43 1 59532836 59532977

Neighbor

gene id symbol gene type direction distance location
LOC118940539 NA coding upstream 1131 59531564 ~ 59531705 (+)
LOC118940665 NA coding upstream 2406 59530289 ~ 59530430 (+)
LOC118940538 NA coding upstream 3678 59529017 ~ 59529158 (+)
LOC118940537 NA coding upstream 4950 59527745 ~ 59527886 (+)
LOC118940654 NA coding upstream 6222 59526473 ~ 59526614 (+)
LOC118940676 NA coding downstream 1398 59534375 ~ 59534516 (+)
LOC118940686 NA coding downstream 2937 59535914 ~ 59536055 (+)
LOC118940540 NA coding downstream 4209 59537186 ~ 59537327 (+)
LOC118940687 NA coding downstream 5481 59538458 ~ 59538599 (+)
LOC118940688 NA coding downstream 6753 59539730 ~ 59539871 (+)
G1470290 NA non-coding upstream 26499 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 36710 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 81654 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 127043 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 268307 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 79879 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 81088 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 106229 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 110258 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 114763 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1024951 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1918536 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1984658 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2049247 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2382493 57149303 ~ 57150343 (+)
G1470607 NA other downstream 568915 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1439501 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2023342 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3165526 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3177362 62710339 ~ 62711136 (+)

Expression


Co-expression Network