LOC118940676


Basic Information

Item Value
gene id LOC118940676
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59534375 ~ 59534516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037262.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037262.1 True 142 mRNA 0.43 1 59534375 59534516

Neighbor

gene id symbol gene type direction distance location
LOC118940543 NA coding upstream 1398 59532836 ~ 59532977 (+)
LOC118940539 NA coding upstream 2670 59531564 ~ 59531705 (+)
LOC118940665 NA coding upstream 3945 59530289 ~ 59530430 (+)
LOC118940538 NA coding upstream 5217 59529017 ~ 59529158 (+)
LOC118940537 NA coding upstream 6489 59527745 ~ 59527886 (+)
LOC118940686 NA coding downstream 1398 59535914 ~ 59536055 (+)
LOC118940540 NA coding downstream 2670 59537186 ~ 59537327 (+)
LOC118940687 NA coding downstream 3942 59538458 ~ 59538599 (+)
LOC118940688 NA coding downstream 5214 59539730 ~ 59539871 (+)
LOC118940689 NA coding downstream 6485 59541001 ~ 59541142 (+)
G1470290 NA non-coding upstream 28038 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 38249 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 83193 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 128582 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 269846 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 78340 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 79549 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 104690 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 108719 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 113224 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1026490 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1920075 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1986197 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2050786 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2384032 57149303 ~ 57150343 (+)
G1470607 NA other downstream 567376 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1437962 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2021803 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3163987 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3175823 62710339 ~ 62711136 (+)

Expression


Co-expression Network