LOC118940540


Basic Information

Item Value
gene id LOC118940540
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59537186 ~ 59537327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037136.1
gttctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037136.1 True 142 mRNA 0.44 1 59537186 59537327

Neighbor

gene id symbol gene type direction distance location
LOC118940686 NA coding upstream 1131 59535914 ~ 59536055 (+)
LOC118940676 NA coding upstream 2670 59534375 ~ 59534516 (+)
LOC118940543 NA coding upstream 4209 59532836 ~ 59532977 (+)
LOC118940539 NA coding upstream 5481 59531564 ~ 59531705 (+)
LOC118940665 NA coding upstream 6756 59530289 ~ 59530430 (+)
LOC118940687 NA coding downstream 1131 59538458 ~ 59538599 (+)
LOC118940688 NA coding downstream 2403 59539730 ~ 59539871 (+)
LOC118940689 NA coding downstream 3674 59541001 ~ 59541142 (+)
LOC118940549 NA coding downstream 4946 59542273 ~ 59542414 (+)
LOC118940690 NA coding downstream 6223 59543550 ~ 59543691 (+)
G1470290 NA non-coding upstream 30849 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 41060 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 86004 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 131393 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 272657 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 75529 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 76738 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 101879 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 105908 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 110413 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1029301 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1922886 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1989008 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2053597 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2386843 57149303 ~ 57150343 (+)
G1470607 NA other downstream 564565 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1435151 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2018992 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3161176 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3173012 62710339 ~ 62711136 (+)

Expression


Co-expression Network