LOC118940687


Basic Information

Item Value
gene id LOC118940687
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59538458 ~ 59538599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037273.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037273.1 True 142 mRNA 0.43 1 59538458 59538599

Neighbor

gene id symbol gene type direction distance location
LOC118940540 NA coding upstream 1131 59537186 ~ 59537327 (+)
LOC118940686 NA coding upstream 2403 59535914 ~ 59536055 (+)
LOC118940676 NA coding upstream 3942 59534375 ~ 59534516 (+)
LOC118940543 NA coding upstream 5481 59532836 ~ 59532977 (+)
LOC118940539 NA coding upstream 6753 59531564 ~ 59531705 (+)
LOC118940688 NA coding downstream 1131 59539730 ~ 59539871 (+)
LOC118940689 NA coding downstream 2402 59541001 ~ 59541142 (+)
LOC118940549 NA coding downstream 3674 59542273 ~ 59542414 (+)
LOC118940690 NA coding downstream 4951 59543550 ~ 59543691 (+)
LOC118940691 NA coding downstream 6227 59544826 ~ 59544967 (+)
G1470290 NA non-coding upstream 32121 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 42332 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 87276 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 132665 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 273929 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 74257 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 75466 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 100607 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 104636 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 109141 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1030573 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1924158 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1990280 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2054869 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2388115 57149303 ~ 57150343 (+)
G1470607 NA other downstream 563293 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1433879 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2017720 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3159904 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3171740 62710339 ~ 62711136 (+)

Expression


Co-expression Network