LOC118940688


Basic Information

Item Value
gene id LOC118940688
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59539730 ~ 59539871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037274.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037274.1 True 142 mRNA 0.43 1 59539730 59539871

Neighbor

gene id symbol gene type direction distance location
LOC118940687 NA coding upstream 1131 59538458 ~ 59538599 (+)
LOC118940540 NA coding upstream 2403 59537186 ~ 59537327 (+)
LOC118940686 NA coding upstream 3675 59535914 ~ 59536055 (+)
LOC118940676 NA coding upstream 5214 59534375 ~ 59534516 (+)
LOC118940543 NA coding upstream 6753 59532836 ~ 59532977 (+)
LOC118940689 NA coding downstream 1130 59541001 ~ 59541142 (+)
LOC118940549 NA coding downstream 2402 59542273 ~ 59542414 (+)
LOC118940690 NA coding downstream 3679 59543550 ~ 59543691 (+)
LOC118940691 NA coding downstream 4955 59544826 ~ 59544967 (+)
LOC118940692 NA coding downstream 6225 59546096 ~ 59546237 (+)
G1470290 NA non-coding upstream 33393 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 43604 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 88548 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 133937 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 275201 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 72985 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 74194 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 99335 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 103364 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 107869 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1031845 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1925430 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1991552 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2056141 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2389387 57149303 ~ 57150343 (+)
G1470607 NA other downstream 562021 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1432607 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2016448 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3158632 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3170468 62710339 ~ 62711136 (+)

Expression


Co-expression Network