LOC118940689


Basic Information

Item Value
gene id LOC118940689
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59541001 ~ 59541142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037275.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037275.1 True 142 mRNA 0.43 1 59541001 59541142

Neighbor

gene id symbol gene type direction distance location
LOC118940688 NA coding upstream 1130 59539730 ~ 59539871 (+)
LOC118940687 NA coding upstream 2402 59538458 ~ 59538599 (+)
LOC118940540 NA coding upstream 3674 59537186 ~ 59537327 (+)
LOC118940686 NA coding upstream 4946 59535914 ~ 59536055 (+)
LOC118940676 NA coding upstream 6485 59534375 ~ 59534516 (+)
LOC118940549 NA coding downstream 1131 59542273 ~ 59542414 (+)
LOC118940690 NA coding downstream 2408 59543550 ~ 59543691 (+)
LOC118940691 NA coding downstream 3684 59544826 ~ 59544967 (+)
LOC118940692 NA coding downstream 4954 59546096 ~ 59546237 (+)
LOC118940551 NA coding downstream 6229 59547371 ~ 59547511 (+)
G1470290 NA non-coding upstream 34664 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 44875 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 89819 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 135208 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 276472 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 71714 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 72923 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 98064 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 102093 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 106598 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1033116 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1926701 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1992823 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2057412 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2390658 57149303 ~ 57150343 (+)
G1470607 NA other downstream 560750 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1431336 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2015177 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3157361 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3169197 62710339 ~ 62711136 (+)

Expression


Co-expression Network