LOC118940549


Basic Information

Item Value
gene id LOC118940549
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59542273 ~ 59542414 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037144.1
agtgtttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaacatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037144.1 True 142 mRNA 0.44 1 59542273 59542414

Neighbor

gene id symbol gene type direction distance location
LOC118940689 NA coding upstream 1131 59541001 ~ 59541142 (+)
LOC118940688 NA coding upstream 2402 59539730 ~ 59539871 (+)
LOC118940687 NA coding upstream 3674 59538458 ~ 59538599 (+)
LOC118940540 NA coding upstream 4946 59537186 ~ 59537327 (+)
LOC118940686 NA coding upstream 6218 59535914 ~ 59536055 (+)
LOC118940690 NA coding downstream 1136 59543550 ~ 59543691 (+)
LOC118940691 NA coding downstream 2412 59544826 ~ 59544967 (+)
LOC118940692 NA coding downstream 3682 59546096 ~ 59546237 (+)
LOC118940551 NA coding downstream 4957 59547371 ~ 59547511 (+)
LOC118940693 NA coding downstream 6227 59548641 ~ 59548782 (+)
G1470290 NA non-coding upstream 35936 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 46147 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 91091 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 136480 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 277744 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 70442 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 71651 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 96792 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 100821 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 105326 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1034388 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1927973 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1994095 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2058684 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2391930 57149303 ~ 57150343 (+)
G1470607 NA other downstream 559478 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1430064 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2013905 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3156089 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3167925 62710339 ~ 62711136 (+)

Expression


Co-expression Network