LOC118940566


Basic Information

Item Value
gene id LOC118940566
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59555913 ~ 59556053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037154.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037154.1 True 141 mRNA 0.42 1 59555913 59556053

Neighbor

gene id symbol gene type direction distance location
LOC118940697 NA coding upstream 1122 59554650 ~ 59554791 (+)
LOC118940696 NA coding upstream 3316 59552456 ~ 59552597 (+)
LOC118940695 NA coding upstream 4587 59551185 ~ 59551326 (+)
LOC118940694 NA coding upstream 5859 59549913 ~ 59550054 (+)
LOC118940693 NA coding upstream 7131 59548641 ~ 59548782 (+)
LOC118940698 NA coding downstream 1126 59557179 ~ 59557320 (+)
LOC118940699 NA coding downstream 2395 59558448 ~ 59558589 (+)
LOC118940700 NA coding downstream 3665 59559718 ~ 59559859 (+)
LOC118940577 NA coding downstream 4935 59560988 ~ 59561128 (+)
LOC118940701 NA coding downstream 6204 59562257 ~ 59562398 (+)
G1470290 NA non-coding upstream 49576 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 59787 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 104731 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 150120 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 291384 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 56803 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 58012 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 83153 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 87182 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 91687 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1048028 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1941613 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2007735 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2072324 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2405570 57149303 ~ 57150343 (+)
G1470607 NA other downstream 545839 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1416425 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2000266 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3142450 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3154286 62710339 ~ 62711136 (+)

Expression


Co-expression Network