LOC118940700


Basic Information

Item Value
gene id LOC118940700
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59559718 ~ 59559859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037286.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037286.1 True 142 mRNA 0.42 1 59559718 59559859

Neighbor

gene id symbol gene type direction distance location
LOC118940699 NA coding upstream 1129 59558448 ~ 59558589 (+)
LOC118940698 NA coding upstream 2398 59557179 ~ 59557320 (+)
LOC118940566 NA coding upstream 3665 59555913 ~ 59556053 (+)
LOC118940697 NA coding upstream 4927 59554650 ~ 59554791 (+)
LOC118940696 NA coding upstream 7121 59552456 ~ 59552597 (+)
LOC118940577 NA coding downstream 1129 59560988 ~ 59561128 (+)
LOC118940701 NA coding downstream 2398 59562257 ~ 59562398 (+)
LOC118940702 NA coding downstream 3672 59563531 ~ 59563672 (+)
LOC118940703 NA coding downstream 4949 59564808 ~ 59564949 (+)
LOC118940704 NA coding downstream 6225 59566084 ~ 59566225 (+)
G1470290 NA non-coding upstream 53381 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 63592 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 108536 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 153925 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 295189 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 52997 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 54206 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 79347 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 83376 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 87881 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1051833 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1945418 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2011540 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2076129 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2409375 57149303 ~ 57150343 (+)
G1470607 NA other downstream 542033 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1412619 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1996460 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3138644 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3150480 62710339 ~ 62711136 (+)

Expression


Co-expression Network