LOC118940577


Basic Information

Item Value
gene id LOC118940577
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59560988 ~ 59561128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037165.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaatacccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037165.1 True 141 mRNA 0.42 1 59560988 59561128

Neighbor

gene id symbol gene type direction distance location
LOC118940700 NA coding upstream 1129 59559718 ~ 59559859 (+)
LOC118940699 NA coding upstream 2399 59558448 ~ 59558589 (+)
LOC118940698 NA coding upstream 3668 59557179 ~ 59557320 (+)
LOC118940566 NA coding upstream 4935 59555913 ~ 59556053 (+)
LOC118940697 NA coding upstream 6197 59554650 ~ 59554791 (+)
LOC118940701 NA coding downstream 1129 59562257 ~ 59562398 (+)
LOC118940702 NA coding downstream 2403 59563531 ~ 59563672 (+)
LOC118940703 NA coding downstream 3680 59564808 ~ 59564949 (+)
LOC118940704 NA coding downstream 4956 59566084 ~ 59566225 (+)
LOC118940705 NA coding downstream 6229 59567357 ~ 59567498 (+)
G1470290 NA non-coding upstream 54651 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 64862 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 109806 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 155195 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 296459 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 51728 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 52937 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 78078 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 82107 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 86612 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1053103 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1946688 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2012810 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2077399 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2410645 57149303 ~ 57150343 (+)
G1470607 NA other downstream 540764 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1411350 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1995191 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3137375 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3149211 62710339 ~ 62711136 (+)

Expression


Co-expression Network