LOC118940701


Basic Information

Item Value
gene id LOC118940701
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59562257 ~ 59562398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037287.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037287.1 True 142 mRNA 0.42 1 59562257 59562398

Neighbor

gene id symbol gene type direction distance location
LOC118940577 NA coding upstream 1129 59560988 ~ 59561128 (+)
LOC118940700 NA coding upstream 2398 59559718 ~ 59559859 (+)
LOC118940699 NA coding upstream 3668 59558448 ~ 59558589 (+)
LOC118940698 NA coding upstream 4937 59557179 ~ 59557320 (+)
LOC118940566 NA coding upstream 6204 59555913 ~ 59556053 (+)
LOC118940702 NA coding downstream 1133 59563531 ~ 59563672 (+)
LOC118940703 NA coding downstream 2410 59564808 ~ 59564949 (+)
LOC118940704 NA coding downstream 3686 59566084 ~ 59566225 (+)
LOC118940705 NA coding downstream 4959 59567357 ~ 59567498 (+)
LOC118940541 NA coding downstream 6232 59568630 ~ 59568771 (+)
G1470290 NA non-coding upstream 55920 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 66131 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 111075 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 156464 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 297728 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 50458 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 51667 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 76808 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 80837 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 85342 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1054372 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1947957 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2014079 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2078668 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2411914 57149303 ~ 57150343 (+)
G1470607 NA other downstream 539494 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1410080 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1993921 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3136105 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3147941 62710339 ~ 62711136 (+)

Expression


Co-expression Network