LOC118940541


Basic Information

Item Value
gene id LOC118940541
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59568630 ~ 59568771 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037137.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggtgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037137.1 True 142 mRNA 0.42 1 59568630 59568771

Neighbor

gene id symbol gene type direction distance location
LOC118940705 NA coding upstream 1132 59567357 ~ 59567498 (+)
LOC118940704 NA coding upstream 2405 59566084 ~ 59566225 (+)
LOC118940703 NA coding upstream 3681 59564808 ~ 59564949 (+)
LOC118940702 NA coding upstream 4958 59563531 ~ 59563672 (+)
LOC118940701 NA coding upstream 6232 59562257 ~ 59562398 (+)
LOC118940706 NA coding downstream 1132 59569903 ~ 59570044 (+)
LOC118940707 NA coding downstream 2405 59571176 ~ 59571317 (+)
LOC118940588 NA coding downstream 3677 59572448 ~ 59572588 (+)
LOC118940708 NA coding downstream 4949 59573720 ~ 59573861 (+)
LOC118940709 NA coding downstream 6222 59574993 ~ 59575134 (+)
G1470290 NA non-coding upstream 62293 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 72504 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 117448 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 162837 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 304101 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 44085 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 45294 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 70435 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 74464 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 78969 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1060745 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1954330 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2020452 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2085041 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2418287 57149303 ~ 57150343 (+)
G1470607 NA other downstream 533121 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1403707 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1987548 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3129732 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3141568 62710339 ~ 62711136 (+)

Expression


Co-expression Network