LOC118940707


Basic Information

Item Value
gene id LOC118940707
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59571176 ~ 59571317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037293.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037293.1 True 142 mRNA 0.42 1 59571176 59571317

Neighbor

gene id symbol gene type direction distance location
LOC118940706 NA coding upstream 1132 59569903 ~ 59570044 (+)
LOC118940541 NA coding upstream 2405 59568630 ~ 59568771 (+)
LOC118940705 NA coding upstream 3678 59567357 ~ 59567498 (+)
LOC118940704 NA coding upstream 4951 59566084 ~ 59566225 (+)
LOC118940703 NA coding upstream 6227 59564808 ~ 59564949 (+)
LOC118940588 NA coding downstream 1131 59572448 ~ 59572588 (+)
LOC118940708 NA coding downstream 2403 59573720 ~ 59573861 (+)
LOC118940709 NA coding downstream 3676 59574993 ~ 59575134 (+)
LOC118940710 NA coding downstream 4949 59576266 ~ 59576407 (+)
LOC118940711 NA coding downstream 6222 59577539 ~ 59577680 (+)
G1470290 NA non-coding upstream 64839 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 75050 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 119994 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 165383 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 306647 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 41539 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 42748 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 67889 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 71918 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 76423 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1063291 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1956876 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2022998 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2087587 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2420833 57149303 ~ 57150343 (+)
G1470607 NA other downstream 530575 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1401161 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1985002 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3127186 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3139022 62710339 ~ 62711136 (+)

Expression


Co-expression Network