LOC118940708


Basic Information

Item Value
gene id LOC118940708
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59573720 ~ 59573861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037294.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037294.1 True 142 mRNA 0.42 1 59573720 59573861

Neighbor

gene id symbol gene type direction distance location
LOC118940588 NA coding upstream 1132 59572448 ~ 59572588 (+)
LOC118940707 NA coding upstream 2403 59571176 ~ 59571317 (+)
LOC118940706 NA coding upstream 3676 59569903 ~ 59570044 (+)
LOC118940541 NA coding upstream 4949 59568630 ~ 59568771 (+)
LOC118940705 NA coding upstream 6222 59567357 ~ 59567498 (+)
LOC118940709 NA coding downstream 1132 59574993 ~ 59575134 (+)
LOC118940710 NA coding downstream 2405 59576266 ~ 59576407 (+)
LOC118940711 NA coding downstream 3678 59577539 ~ 59577680 (+)
LOC118940712 NA coding downstream 4951 59578812 ~ 59578953 (+)
LOC118940713 NA coding downstream 6224 59580085 ~ 59580226 (+)
G1470290 NA non-coding upstream 67383 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 77594 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 122538 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 167927 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 309191 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 38995 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 40204 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 65345 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 69374 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 73879 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1065835 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1959420 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2025542 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2090131 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2423377 57149303 ~ 57150343 (+)
G1470607 NA other downstream 528031 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1398617 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1982458 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3124642 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3136478 62710339 ~ 62711136 (+)

Expression


Co-expression Network