LOC118940520



Basic Information


Item Value
gene id LOC118940520
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59585177 ~ 59585318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005037116.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005037116.1 True 142 mRNA 0.42 1 59585177 59585318

Neighbor


gene id symbol gene type direction distance location
LOC118940519 NA coding upstream 1132 59583904 ~ 59584045 (+)
LOC118940715 NA coding upstream 2405 59582631 ~ 59582772 (+)
LOC118940714 NA coding upstream 3678 59581358 ~ 59581499 (+)
LOC118940713 NA coding upstream 4951 59580085 ~ 59580226 (+)
LOC118940712 NA coding upstream 6224 59578812 ~ 59578953 (+)
LOC118940542 NA coding downstream 1132 59586450 ~ 59586591 (+)
LOC118940529 NA coding downstream 2405 59587723 ~ 59587864 (+)
LOC118940546 NA coding downstream 3678 59588996 ~ 59589137 (+)
LOC118940521 NA coding downstream 4951 59590269 ~ 59590410 (+)
LOC118940522 NA coding downstream 6224 59591542 ~ 59591683 (+)
G1470290 NA non-coding upstream 78840 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 89051 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 133995 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 179384 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 320648 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 27538 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 28747 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 53888 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 57917 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 62422 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1077292 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1970877 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2036999 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2101588 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2434834 57149303 ~ 57150343 (+)
G1470607 NA other downstream 516574 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1387160 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1971001 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3113185 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3125021 62710339 ~ 62711136 (+)

Expression



Co-expression Network