LOC118940542


Basic Information

Item Value
gene id LOC118940542
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59586450 ~ 59586591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037138.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggtgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037138.1 True 142 mRNA 0.42 1 59586450 59586591

Neighbor

gene id symbol gene type direction distance location
LOC118940520 NA coding upstream 1132 59585177 ~ 59585318 (+)
LOC118940519 NA coding upstream 2405 59583904 ~ 59584045 (+)
LOC118940715 NA coding upstream 3678 59582631 ~ 59582772 (+)
LOC118940714 NA coding upstream 4951 59581358 ~ 59581499 (+)
LOC118940713 NA coding upstream 6224 59580085 ~ 59580226 (+)
LOC118940529 NA coding downstream 1132 59587723 ~ 59587864 (+)
LOC118940546 NA coding downstream 2405 59588996 ~ 59589137 (+)
LOC118940521 NA coding downstream 3678 59590269 ~ 59590410 (+)
LOC118940522 NA coding downstream 4951 59591542 ~ 59591683 (+)
LOC118940523 NA coding downstream 6224 59592815 ~ 59592956 (+)
G1470290 NA non-coding upstream 80113 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 90324 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 135268 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 180657 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 321921 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 26265 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 27474 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 52615 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 56644 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 61149 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1078565 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1972150 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2038272 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2102861 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2436107 57149303 ~ 57150343 (+)
G1470607 NA other downstream 515301 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1385887 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1969728 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3111912 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3123748 62710339 ~ 62711136 (+)

Expression


Co-expression Network