LOC118940546


Basic Information

Item Value
gene id LOC118940546
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59588996 ~ 59589137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037141.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcatgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctgatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037141.1 True 142 mRNA 0.42 1 59588996 59589137

Neighbor

gene id symbol gene type direction distance location
LOC118940529 NA coding upstream 1132 59587723 ~ 59587864 (+)
LOC118940542 NA coding upstream 2405 59586450 ~ 59586591 (+)
LOC118940520 NA coding upstream 3678 59585177 ~ 59585318 (+)
LOC118940519 NA coding upstream 4951 59583904 ~ 59584045 (+)
LOC118940715 NA coding upstream 6224 59582631 ~ 59582772 (+)
LOC118940521 NA coding downstream 1132 59590269 ~ 59590410 (+)
LOC118940522 NA coding downstream 2405 59591542 ~ 59591683 (+)
LOC118940523 NA coding downstream 3678 59592815 ~ 59592956 (+)
LOC118940524 NA coding downstream 4951 59594088 ~ 59594229 (+)
LOC118940545 NA coding downstream 6224 59595361 ~ 59595502 (+)
G1470290 NA non-coding upstream 82659 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 92870 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 137814 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 183203 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 324467 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 23719 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 24928 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 50069 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 54098 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 58603 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1081111 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1974696 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2040818 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2105407 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2438653 57149303 ~ 57150343 (+)
G1470607 NA other downstream 512755 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1383341 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1967182 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3109366 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3121202 62710339 ~ 62711136 (+)

Expression


Co-expression Network