LOC118940545


Basic Information

Item Value
gene id LOC118940545
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59595361 ~ 59595502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037140.1
attctttcgcagaggtgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgtttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037140.1 True 142 mRNA 0.41 1 59595361 59595502

Neighbor

gene id symbol gene type direction distance location
LOC118940524 NA coding upstream 1132 59594088 ~ 59594229 (+)
LOC118940523 NA coding upstream 2405 59592815 ~ 59592956 (+)
LOC118940522 NA coding upstream 3678 59591542 ~ 59591683 (+)
LOC118940521 NA coding upstream 4951 59590269 ~ 59590410 (+)
LOC118940546 NA coding upstream 6224 59588996 ~ 59589137 (+)
LOC118940554 NA coding downstream 1131 59596633 ~ 59596774 (+)
LOC118940530 NA coding downstream 2403 59597905 ~ 59598046 (+)
LOC118940531 NA coding downstream 3675 59599177 ~ 59599318 (+)
LOC118940532 NA coding downstream 4947 59600449 ~ 59600590 (+)
LOC118940525 NA coding downstream 6219 59601721 ~ 59601862 (+)
G1470290 NA non-coding upstream 89024 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 99235 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 144179 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 189568 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 330832 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 17354 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 18563 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 43704 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 47733 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 52238 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1087476 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1981061 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2047183 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2111772 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2445018 57149303 ~ 57150343 (+)
G1470607 NA other downstream 506390 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1376976 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1960817 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3103001 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3114837 62710339 ~ 62711136 (+)

Expression


Co-expression Network