LOC118940554


Basic Information

Item Value
gene id LOC118940554
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59596633 ~ 59596774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037149.1
gtTCTTTcacagaggcgatatcatagcctatgaagtcaatctgaggcgtgattattgctggttgaaaacttaacccaataccctgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtctcatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037149.1 True 142 mRNA 0.41 1 59596633 59596774

Neighbor

gene id symbol gene type direction distance location
LOC118940545 NA coding upstream 1131 59595361 ~ 59595502 (+)
LOC118940524 NA coding upstream 2404 59594088 ~ 59594229 (+)
LOC118940523 NA coding upstream 3677 59592815 ~ 59592956 (+)
LOC118940522 NA coding upstream 4950 59591542 ~ 59591683 (+)
LOC118940521 NA coding upstream 6223 59590269 ~ 59590410 (+)
LOC118940530 NA coding downstream 1131 59597905 ~ 59598046 (+)
LOC118940531 NA coding downstream 2403 59599177 ~ 59599318 (+)
LOC118940532 NA coding downstream 3675 59600449 ~ 59600590 (+)
LOC118940525 NA coding downstream 4947 59601721 ~ 59601862 (+)
LOC118940535 NA coding downstream 6219 59602993 ~ 59603134 (+)
G1470290 NA non-coding upstream 90296 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 100507 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 145451 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 190840 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 332104 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 16082 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 17291 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 42432 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 46461 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 50966 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1088748 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1982333 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2048455 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2113044 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2446290 57149303 ~ 57150343 (+)
G1470607 NA other downstream 505118 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1375704 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1959545 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3101729 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3113565 62710339 ~ 62711136 (+)

Expression


Co-expression Network