LOC118940531


Basic Information

Item Value
gene id LOC118940531
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59599177 ~ 59599318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037127.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtcttatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037127.1 True 142 mRNA 0.42 1 59599177 59599318

Neighbor

gene id symbol gene type direction distance location
LOC118940530 NA coding upstream 1131 59597905 ~ 59598046 (+)
LOC118940554 NA coding upstream 2403 59596633 ~ 59596774 (+)
LOC118940545 NA coding upstream 3675 59595361 ~ 59595502 (+)
LOC118940524 NA coding upstream 4948 59594088 ~ 59594229 (+)
LOC118940523 NA coding upstream 6221 59592815 ~ 59592956 (+)
LOC118940532 NA coding downstream 1131 59600449 ~ 59600590 (+)
LOC118940525 NA coding downstream 2403 59601721 ~ 59601862 (+)
LOC118940535 NA coding downstream 3675 59602993 ~ 59603134 (+)
LOC118940536 NA coding downstream 4947 59604265 ~ 59604406 (+)
LOC118940548 NA coding downstream 6219 59605537 ~ 59605678 (+)
G1470290 NA non-coding upstream 92840 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 103051 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 147995 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 193384 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 334648 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 13538 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 14747 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 39888 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 43917 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 48422 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1091292 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1984877 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2050999 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2115588 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2448834 57149303 ~ 57150343 (+)
G1470607 NA other downstream 502574 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1373160 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1957001 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3099185 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3111021 62710339 ~ 62711136 (+)

Expression


Co-expression Network