LOC118940548


Basic Information

Item Value
gene id LOC118940548
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59605537 ~ 59605678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037143.1
gttctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtcttatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037143.1 True 142 mRNA 0.42 1 59605537 59605678

Neighbor

gene id symbol gene type direction distance location
LOC118940536 NA coding upstream 1131 59604265 ~ 59604406 (+)
LOC118940535 NA coding upstream 2403 59602993 ~ 59603134 (+)
LOC118940525 NA coding upstream 3675 59601721 ~ 59601862 (+)
LOC118940532 NA coding upstream 4947 59600449 ~ 59600590 (+)
LOC118940531 NA coding upstream 6219 59599177 ~ 59599318 (+)
LOC118940533 NA coding downstream 1131 59606809 ~ 59606950 (+)
LOC118940534 NA coding downstream 2403 59608081 ~ 59608222 (+)
LOC118940526 NA coding downstream 3676 59609354 ~ 59609495 (+)
LOC118940553 NA coding downstream 4940 59610618 ~ 59610759 (+)
LOC118940558 NA coding downstream 6212 59611890 ~ 59612012 (+)
G1470290 NA non-coding upstream 99200 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 109411 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 154355 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 199744 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 341008 59258342 ~ 59266492 (+)
LOC118940527 NA non-coding downstream 7178 59612856 ~ 59613886 (+)
G1470301 NA non-coding downstream 8387 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 33528 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 37557 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 42062 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1097652 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1991237 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2057359 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2121948 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2455194 57149303 ~ 57150343 (+)
G1470607 NA other downstream 496214 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1366800 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1950641 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3092825 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3104661 62710339 ~ 62711136 (+)

Expression


Co-expression Network