LOC118940533


Basic Information

Item Value
gene id LOC118940533
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59606809 ~ 59606950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037129.1
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtcttatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037129.1 True 142 mRNA 0.42 1 59606809 59606950

Neighbor

gene id symbol gene type direction distance location
LOC118940548 NA coding upstream 1131 59605537 ~ 59605678 (+)
LOC118940536 NA coding upstream 2403 59604265 ~ 59604406 (+)
LOC118940535 NA coding upstream 3675 59602993 ~ 59603134 (+)
LOC118940525 NA coding upstream 4947 59601721 ~ 59601862 (+)
LOC118940532 NA coding upstream 6219 59600449 ~ 59600590 (+)
LOC118940534 NA coding downstream 1131 59608081 ~ 59608222 (+)
LOC118940526 NA coding downstream 2404 59609354 ~ 59609495 (+)
LOC118940553 NA coding downstream 3668 59610618 ~ 59610759 (+)
LOC118940558 NA coding downstream 4940 59611890 ~ 59612012 (+)
LOC118940527 NA coding downstream 5998 59612856 ~ 59613886 (+)
G1470290 NA non-coding upstream 100472 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 110683 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 155627 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 201016 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 342280 59258342 ~ 59266492 (+)
G1470301 NA non-coding downstream 7115 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 32256 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 36285 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 40790 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1098924 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1992509 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2058631 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2123220 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2456466 57149303 ~ 57150343 (+)
G1470607 NA other downstream 494942 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1365528 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1949369 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3091553 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3103389 62710339 ~ 62711136 (+)

Expression


Co-expression Network