LOC118940553


Basic Information

Item Value
gene id LOC118940553
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59610618 ~ 59610759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037148.1
GTTCTTTcacagaggcgatatcatagcctatgaagtcaatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtcttatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037148.1 True 142 mRNA 0.41 1 59610618 59610759

Neighbor

gene id symbol gene type direction distance location
LOC118940526 NA coding upstream 1123 59609354 ~ 59609495 (+)
LOC118940534 NA coding upstream 2396 59608081 ~ 59608222 (+)
LOC118940533 NA coding upstream 3668 59606809 ~ 59606950 (+)
LOC118940548 NA coding upstream 4940 59605537 ~ 59605678 (+)
LOC118940536 NA coding upstream 6212 59604265 ~ 59604406 (+)
LOC118940558 NA coding downstream 1131 59611890 ~ 59612012 (+)
LOC118940527 NA coding downstream 2189 59612856 ~ 59613886 (+)
LOC118940550 NA coding downstream 3556 59614315 ~ 59614456 (+)
LOC118940561 NA coding downstream 4828 59615587 ~ 59615709 (+)
LOC118940528 NA coding downstream 5886 59616645 ~ 59616786 (+)
G1470290 NA non-coding upstream 104281 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 114492 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 159436 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 204825 59405174 ~ 59405793 (+)
LOC110494244 NA non-coding upstream 346089 59258342 ~ 59266492 (+)
G1470301 NA non-coding downstream 3306 59614065 ~ 59618582 (+)
G1470331 NA non-coding downstream 28447 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 32476 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 36981 59647740 ~ 59647996 (+)
G1469076 NA other upstream 1102733 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1996318 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2062440 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2127029 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2460275 57149303 ~ 57150343 (+)
G1470607 NA other downstream 491133 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1361719 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1945560 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3087744 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3099580 62710339 ~ 62711136 (+)

Expression


Co-expression Network