LOC118940547


Basic Information

Item Value
gene id LOC118940547
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59617917 ~ 59618058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037142.1
gttctttcgcagaggcgatatcatagcctatgaagtcaatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatatagtcagccttggcaatttttgatagtcttatgtgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037142.1 True 142 mRNA 0.42 1 59617917 59618058

Neighbor

gene id symbol gene type direction distance location
LOC118940528 NA coding upstream 1131 59616645 ~ 59616786 (+)
LOC118940561 NA coding upstream 2208 59615587 ~ 59615709 (+)
LOC118940550 NA coding upstream 3461 59614315 ~ 59614456 (+)
LOC118940527 NA coding upstream 4828 59612856 ~ 59613886 (+)
LOC118940558 NA coding upstream 5905 59611890 ~ 59612012 (+)
LOC118940559 NA coding downstream 1131 59619189 ~ 59619311 (+)
LOC118940560 NA coding downstream 2189 59620247 ~ 59620369 (+)
LOC118940556 NA coding downstream 3246 59621304 ~ 59621436 (+)
LOC118940557 NA coding downstream 4303 59622361 ~ 59622486 (+)
LOC110494250 LOC106565597 coding downstream 39743 59657801 ~ 59670107 (+)
G1470290 NA non-coding upstream 111580 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 121791 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 166735 59450762 ~ 59451182 (+)
G1469871 NA non-coding upstream 212124 59405174 ~ 59405793 (+)
G1470331 NA non-coding downstream 21148 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 25177 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 29682 59647740 ~ 59647996 (+)
G1470383 LOC106583170 non-coding downstream 98551 59716609 ~ 59718373 (+)
G1470431 NA non-coding downstream 292350 59910408 ~ 59911460 (+)
G1469076 NA other upstream 1110032 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2003617 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2069739 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2134328 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2467574 57149303 ~ 57150343 (+)
G1470607 NA other downstream 483834 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1354420 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1938261 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3080445 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3092281 62710339 ~ 62711136 (+)

Expression


Co-expression Network