LOC118940560


Basic Information

Item Value
gene id LOC118940560
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59620247 ~ 59620369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118940560
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggtgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaatattGTCAGCCTTGgcagcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118940560 True 123 mRNA 0.46 1 59620247 59620369

Neighbor

gene id symbol gene type direction distance location
LOC118940559 NA coding upstream 936 59619189 ~ 59619311 (+)
LOC118940547 NA coding upstream 2189 59617917 ~ 59618058 (+)
LOC118940528 NA coding upstream 3461 59616645 ~ 59616786 (+)
LOC118940561 NA coding upstream 4538 59615587 ~ 59615709 (+)
LOC118940550 NA coding upstream 5791 59614315 ~ 59614456 (+)
LOC118940556 NA coding downstream 935 59621304 ~ 59621436 (+)
LOC118940557 NA coding downstream 1992 59622361 ~ 59622486 (+)
LOC110494250 LOC106565597 coding downstream 37432 59657801 ~ 59670107 (+)
LOC110494251 LOC106565596 coding downstream 236856 59857225 ~ 59887042 (+)
LOC110494255 LOC106565587 coding downstream 442881 60063250 ~ 60078437 (+)
G1470301 NA non-coding upstream 1665 59614065 ~ 59618582 (+)
LOC118940527 NA non-coding upstream 6361 59612856 ~ 59613886 (+)
G1470290 NA non-coding upstream 113910 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 124121 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 169065 59450762 ~ 59451182 (+)
G1470331 NA non-coding downstream 18837 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 22866 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 27371 59647740 ~ 59647996 (+)
G1470383 LOC106583170 non-coding downstream 96240 59716609 ~ 59718373 (+)
G1470431 NA non-coding downstream 290039 59910408 ~ 59911460 (+)
G1469076 NA other upstream 1112362 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2005947 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2072069 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2136658 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2469904 57149303 ~ 57150343 (+)
G1470607 NA other downstream 481523 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1352109 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1935950 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3078134 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3089970 62710339 ~ 62711136 (+)

Expression


Co-expression Network