LOC118940557


Basic Information

Item Value
gene id LOC118940557
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59622361 ~ 59622486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118940557
attctttcgcagaggcgatatcatagcctatgaagtccatctgaggcgtgattattgctggttgaaaacttaacccaataccccgcttgggatgacttgaaagcGGGtttgcagattacccaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118940557 True 126 mRNA 0.44 1 59622361 59622486

Neighbor

gene id symbol gene type direction distance location
LOC118940556 NA coding upstream 925 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 1992 59620247 ~ 59620369 (+)
LOC118940559 NA coding upstream 3050 59619189 ~ 59619311 (+)
LOC118940547 NA coding upstream 4303 59617917 ~ 59618058 (+)
LOC118940528 NA coding upstream 5575 59616645 ~ 59616786 (+)
LOC110494250 LOC106565597 coding downstream 35315 59657801 ~ 59670107 (+)
LOC110494251 LOC106565596 coding downstream 234739 59857225 ~ 59887042 (+)
LOC110494255 LOC106565587 coding downstream 440764 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 456264 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 622299 60244785 ~ 60247910 (+)
G1470301 NA non-coding upstream 3779 59614065 ~ 59618582 (+)
LOC118940527 NA non-coding upstream 8475 59612856 ~ 59613886 (+)
G1470290 NA non-coding upstream 116024 59506034 ~ 59506337 (+)
G1470277 NA non-coding upstream 126235 59495827 ~ 59496126 (+)
G1469990 NA non-coding upstream 171179 59450762 ~ 59451182 (+)
G1470331 NA non-coding downstream 16720 59639206 ~ 59639439 (+)
G1470335 NA non-coding downstream 20749 59643235 ~ 59643831 (+)
G1470341 NA non-coding downstream 25254 59647740 ~ 59647996 (+)
G1470383 LOC106583170 non-coding downstream 94123 59716609 ~ 59718373 (+)
G1470431 NA non-coding downstream 287922 59910408 ~ 59911460 (+)
G1469076 NA other upstream 1114476 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2008061 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2074183 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2138772 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2472018 57149303 ~ 57150343 (+)
G1470607 NA other downstream 479406 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1349992 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1933833 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3076017 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3087853 62710339 ~ 62711136 (+)

Expression


Co-expression Network