Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110494272 |
| gene name | gpx1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60970324 ~ 60971719 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gpx1 | Enables SH3 domain binding activity; glutathione peroxidase activity; and phospholipid-hydroperoxide glutathione peroxidase activity. Involved in several processes, including UV protection; icosanoid metabolic process; and negative regulation of apoptotic process. Located in mitochondrion. Colocalizes with Lewy body. Implicated in several diseases, including anemia (multiple); cardiovascular system disease (multiple); hematologic cancer (multiple); nutritional deficiency disease (multiple); and pseudoxanthoma elasticum. Biomarker of Huntington's disease; artery disease (multiple); diabetic angiopathy; inflammatory bowel disease (multiple); and nephrosis. |
| description |
|---|
| glutathione peroxidase 1b1 |
| id | description |
|---|---|
| K00432 | gpx, btuE, bsaA; glutathione peroxidase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469241.2 | True | 994 | mRNA | 0.46 | 2 | 60970324 | 60971719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494264 | oxtr | coding | upstream | 370710 | 60575678 ~ 60599614 (+) |
| rad18 | rad18 | coding | upstream | 461729 | 60433926 ~ 60508595 (+) |
| srgap3 | srgap3 | coding | upstream | 586913 | 60265479 ~ 60383800 (+) |
| LOC110494259 | LOC106565584 | coding | upstream | 722414 | 60244785 ~ 60247910 (+) |
| LOC110494256 | LOC106565588 | coding | upstream | 874954 | 60078750 ~ 60095370 (+) |
| LOC110494274 | brk1 | coding | downstream | 43006 | 61014725 ~ 61019187 (+) |
| LOC110494275 | LOC106565569 | coding | downstream | 52989 | 61024708 ~ 61037602 (+) |
| LOC110494276 | NA | coding | downstream | 67559 | 61039278 ~ 61043722 (+) |
| LOC110494279 | LOC106565568 | coding | downstream | 82912 | 61054631 ~ 61129367 (+) |
| LOC110494281 | gnai2 | coding | downstream | 173792 | 61145511 ~ 61257368 (+) |
| G1471709 | NA | non-coding | upstream | 83595 | 60886363 ~ 60886729 (+) |
| G1471687 | NA | non-coding | upstream | 122580 | 60847292 ~ 60847744 (+) |
| G1471620 | NA | non-coding | upstream | 218326 | 60747535 ~ 60751998 (+) |
| G1471606 | NA | non-coding | upstream | 249441 | 60719494 ~ 60720883 (+) |
| G1471569 | NA | non-coding | upstream | 315057 | 60654954 ~ 60655267 (+) |
| G1471794 | NA | non-coding | downstream | 33348 | 61005067 ~ 61005340 (+) |
| G1471795 | NA | non-coding | downstream | 33883 | 61005602 ~ 61005828 (+) |
| G1471732 | NA | non-coding | downstream | 50893 | 61022612 ~ 61023159 (+) |
| G1471796 | NA | non-coding | downstream | 66589 | 61038308 ~ 61038515 (+) |
| G1470607 | NA | other | upstream | 866317 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 2462439 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 3356024 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 3422146 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 3486735 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 759 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 584600 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 1726784 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 1738620 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 2245229 | 63216948 ~ 63217594 (+) |
