LOC110494284 (LOC106565564)


Basic Information

Item Value
gene id LOC110494284
gene name LOC106565564
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61676965 ~ 61684917 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569229.2
tttttcttgATCTGAGCTCAGTACAGACCCCAGTTCAGTATCGGCGACAGACAGAGTCAGGAACAATCTacactcgctctcacacacaaccTACATCCCCAGACCTGTCGAAAATAATGATTTACTAGCACTACGTACACAGGGAGattaccttaacccaaacctggACTATACTACTCTGCTTTCGGACCAGGATAGCACGGGGAACTAAACGTTTTTTCTCTTCTCCTTCCTGCTGCACCCTTTCTTTTTCCTGCTGTGGTCTCTGCTGTCCGAGCAGGTGTCCTCTAACGCCCCCCAGCGAAAAAGAGCGGTACAGCCAGAAGATAGGCAGCCCGAGCAGCCTCATCGTGGGCCCCTCCAGTTTAGCTGTCCGATGCGGAGTGAGGATGAGTCCTGCTCTAGAAGCCCTTATGCAGGCAGACGGGACGCTTCCCTATCCCGGGAAAGGGGTGATGCTTGAGCCCTTTGTGCACCAGGTGGGGGGCCACTCTTGCGTACTGCGTTTCGGCGACCAGACCATCTGCAAGCCCCTCATCCCCCGAGAACACCAGTTCTACAAGAGCCTGCCCCCCGAAATGAGGAAGTTCACCCCCCAGTACAGAGgtgtGGTGTCAGTCAGCTTTGAGGAAGATGAAGAGGGCAACCTGTGTCTCATCGCTTACCCCCTCCACAATGAACCAGAGAACATGGAAAACAAGGACCCCTCAGCTGAATGCGAGCCTAAGAGTAAGATGATCAAGTGGGGCAACAAGAAATCATCGTCCCTATTGCTAGATAATGACAACTACAGCAAAGACCGGGTCAGACAGAGCACTAAAGAGAACAAGAGCAAAAGTTATAATGGTGCGGAGGTGCAGCAGCAGGCTGAAGTTCTCCGCTACAGCCTAGATCGGAAGCAGATCAAACACAACCCCTGGAGTCTGAAATGCCACCAGCAGCACCTCCAGAGGATGAAGGAGAACTCCAAACATCGCAACCAATACAAATTCATCCTGTTGGAGAACCTGACATGGCGTCACGCGGTGCCGTGCGTGCTGGACCTGAAGATGGGCACGCGGCAGCATGGTGACGATGCATCAGAGGAGAAGAAGGCCAACCAGATCCGCAAATGTCAACAGAGCACTTCCGCCTCCATCGGTGTCCGGCTTTGTGGCATGCAGGTGTACCAGTCAGACTCAGGCCAGCTGATGTTCATGAACAAGTACCACGGGAGGAAGCTGAGCCTGCCGGGCTTCAAAGAGGCCCTTTTCCAGTTCTTCCACGATGGGCAGCGTCTGCGGCGCGAGCTGCTCTCCCCGGTGCTGCGGAAGCTCCGGGAGATGCAGGAAACCCTGGAGTCCTGCGAGTCTTACCGcttctactcctcctccctcctcatcatCTATGATGGGGAGCCCCCCCGCCCTCGCCCCCCCACTCGACGCCACcgcggaggagaggagggtgatgaGGACGAGCTCtcagatgaggaagaggaagagggggcgTTTGGGTTCACCCGTGGCTCGGCAGCTGGCAGCAGTGCTGGAGGTAGCAGTAACGGTAGCAGTAACGGTAGCAGTAACGGTAGCGTCGGTCGCTCGTCCCGTGGTGCAGCAGGGGAGGCCAGCAGCCCGGCAGTGGATGTGAGGATGATAGACTTTGCTCATACGACATGTCGCCATTAcggggaggacagtgttgtgcaTGAGGGTCAGGACAGCGGCTACATCTTCGGCCTGCAAAACCTCATCACCATCATCTCCCAGCTGGAGGAGCACAGCGCCGACTAATGACTGAGCCTCCACTCTGGGAAACTCAAACCTAACCTGGGAATAACAGCACTGAGCTGTAGCTGTAGCCCTGCTTTACCCTCCTCCGACAATGGCCTGGTCCTAATGGCCACCACACGGCTGGGGGTCTGACCCCCCACCTACTGTAGGGGACAACCAGGGAGTTTCTGGCCCGGGGGAGAGGCCACGCTGAAGTCGGTTCTGCACTCCCCACCCTCCCCCTGAACCAACATGGGACAGGACCACTTGTGCACTCGTTTGCATCTTGTCTCTGTGACCgttctctttcttcctttctttcttttctaTGTGGTGGGAGAGATTGTGACTGAGACTCTATTAACAGGCTCAAGGACTACTGCATCGTTCTGTCCTCCTTTCCTCTTGTTTCCACCTCTCTGCTCCTCTGTTACAGACTGTTTTCTTTACTGTATGGTCTCTCTGAGAGAGAGACGTAAAGCTTAAGTGTAGTTCTGGGAGTCAGACTTGGTGCTTATTAAACTGTAAGGTGACATGAGGTGTTTGTGGATAGAGTTTGGACTGATATTCCCCCAACAGCACAGCACACACGAGTGGGGGTTGCTTCTGTACAGACTGAACGGGGCTGGCAGCTTTGTAACGAGTGATCTCCTCGCTCTCCTATGGCTGACATTTCATATTTCcaccatacacccccccccccccccccccgtactgTTTTGTCCCTAAATCATCGACATTTAAAGTAGGGGGTAATAAGGGGATTACTTCAATACTTTGTAACTTTCTTTGTTGGTCATTCCTGAAATGGTAACTGAAGAAGAGAATATATTGATTAGGACAATAAATACTATATAGAGAAAGTGTATATAGAatctttatttatttgaaatatttcttaaaaataaactaaacaaaaaaaatgagaaacaaaatggAGAAAATAATTACTACATTCCATATTACTGTTCTAAATGTTCTGTTCTGATGACATTAGTGAATCTAGTTTTTTTGCAAGATACCTCTCTTGTATACCTGTGTGTCAACAGTATGTTGTATGTTGGAAGTAAAATAAAGACATTTCTTTGTGGAAAAGGA

Function

NR:

description
inositol hexakisphosphate kinase 2-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity molecular_function

KEGG:

id description
K07756 IP6K, IHPK; inositol-hexakisphosphate 5-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569229.2 True 2852 mRNA 0.51 3 61676965 61684917

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa-81 NA coding upstream 88502 61588391 ~ 61588463 (+)
LOC110495182 LOC106565603 coding upstream 95096 61579639 ~ 61581869 (+)
LOC110494283 LOC106565563 coding upstream 118637 61555873 ~ 61558328 (+)
LOC110493231 LOC106565565 coding upstream 218494 61353485 ~ 61458471 (+)
LOC110494282 LOC106565567 coding upstream 400718 61270485 ~ 61276247 (+)
LOC110494287 NA coding downstream 23769 61708686 ~ 61714434 (+)
LOC100135961 LOC100135961 coding downstream 38885 61723802 ~ 61727917 (+)
LOC110494288 LOC106565560 coding downstream 45220 61730137 ~ 61734872 (+)
LOC110495184 NA coding downstream 60035 61744952 ~ 61746038 (+)
si:dkey-197j19.5 efcab12 coding downstream 63794 61748711 ~ 61764097 (+)
G1472519 NA non-coding upstream 78420 61598318 ~ 61598545 (+)
G1472515 NA non-coding upstream 82681 61594075 ~ 61594284 (+)
G1472512 NA non-coding upstream 88829 61587867 ~ 61588136 (+)
G1472510 NA non-coding upstream 91996 61584198 ~ 61584969 (+)
G1472504 NA non-coding upstream 100316 61576199 ~ 61576649 (+)
G1472595 NA non-coding downstream 8012 61692929 ~ 61755557 (+)
G1472611 NA non-coding downstream 18691 61703608 ~ 61704013 (+)
LOC110494291 NA non-coding downstream 127664 61809932 ~ 61813656 (+)
G1472696 LOC103358720 non-coding downstream 175430 61860347 ~ 61865508 (+)
G1471723 LOC100380707 other upstream 677902 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1572958 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3169080 58507297 ~ 58507885 (+)
G1467219 NA other upstream 4062665 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 1013586 62698503 ~ 62698815 (+)
G1473177 NA other downstream 1025422 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1532031 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 1973527 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 1999173 63684043 ~ 63691033 (+)

Expression


Co-expression Network