si:ch211-157b11.8 (LOC106565551)


Basic Information

Item Value
gene id si:ch211-157b11.8
gene name LOC106565551
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 61887592 ~ 61894193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950380.1
gtgagagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaaaagagagagagggtacgGGTCAAAGAGATGAATCGATTGTGTGAAGGCGTGTGtccatgcgtgcgtgtgtgtgaatcaGGGGGTGGGTGCATTAGTGCATGTCAGACAGCAAAGAGAGCCGCAGTTATCTAGGAATCTGAGTCAAAGGAACCTCActaacagagacagggagagagagagtgagagagagagagggagagagaaataggaaagagagaagtggagaggatgAAAGAGGCATGcagatagaaagacagacagagaagaagaagttGAAGTTAACACAGAAATAGAAGAAGGTTATGGGAAAAGTGTGGAGGAACACCATCGAAGGCTTCAAACAAAGCATCAAGCGGAGCAGAAACCCATCAAGAACACCAAAAAATACTCAAAAGAAGAGCGTCACTAAAGACTTGTCGGCACCCAAGTCCAAGAGGCTGGCAAGGCAGAACAGCTTTAAGGTGAAAACCGGTGTCAGGGGGGACAGTAAAAGGAAGAACACAGAGGTGTAGTGTCTGAGAGACTGGATTCTGCCCCGAATTCTGCAGCTTTTCACATTCTTTTAGGAGTCTTCCCATGTTTCCATTAGGCTCTCTCGGCGTGCTCCCCctgctgtccctgtgtgtagGGGCCATGTTGTCCCCCCCGGATGCACCTCCAGCCTGTCCCCACTGCAAGGACAGTCTGGTGGCCGCTCCACCTGCGAGGACAGGGTCAGGGGGGTGTGAGGGACGCCCCGGGATGGCAGGCTGCAGGGTGGCGGTCGTCCCCCTGGCTGCCTCTGACCCCCCTCTGAGGGTGGAACACAGACATGAAGCTCGACAGGTTCAGCCCGAGTCCAGGGATGTGTCGGAGCGTCTGGTCCAGTTGCAGCGCTGTATGAATTCCCTCCAGGAGCCAGGGGTCCCCAGGGGCCGTGTAGGCCAGGGAGGGGACACGCTGGGGGCCATTCTGGCTCTGATGGCTGCAGTACTGACAGAGTGTGACCTACACTGTCACAGTCAGGCCCTCAGGGCTATGGCCAGGCGACTGGAGGGGGCAGcggttgggagagagggagagaaagacctTATACTACTGTTGAGGAGCATCACACAACACCCTCCAACAGAATATACAGCTGTAAGAGCGCGAGTGTGTGTTGCAGCGGTCCCCTCAGCGAGGCTGCATCCTCAGGACTGTGCTGAGATCTATCGTTTGGGGATCAAAGAGAACGGAATCTACACCATCCAGCCTGACCCACGCAGACCTGCAGTGGAGGCAGAGTGTGACATGGAGACAGCAGGTGGGGGGTGGACAGTGTTCCAGCGTCGGCGAGATGGCTCGGTGGACTTCAACCGGACGTGGCAGGAGTACCGCGAGGGTTTTGGTTCCCCACAGGGAGAATACTGGCTGGGGAACGCAGCGCTGCATGCTCTCACCAACACTGGTCAACACCTGCTGCGTATACAACTGGAGGACTGGCACCAGCAGAAACGCCAAGCCACCTACAACACTTTCAGAGTGGCAGCAGAGGCACAGAGGTACCGTCTGACAGCACGGGAGTACTCTGGTGACGCGGGCAATGCCCTGAGCTACAGCAAACGCTACAACCACGACGGCCGAGCTTTCAGCACCAACGACCGTGACCACGATCGCTACACGTCAGGGAACTGTGCGGAGTACTATGGTGCAGGCTGGTGGTTCGACGCCTGCCTGGCGTCTAACCTGAATGGACTCTTCTACCGCGGGCGCTACAGCGGGCTGACTAATGGCATATACTGGGGCACCTGGTACATCCTGACAGACATTCACAGCGGAGAGCGCTACTCCTTTAAGAGTGTGGAGATGAAGACACGCCCACGCAACTTCTAATGAAGACTGACCTGGGAGCTAGTAGAAAAACAGACCCAAACAGAATCTTTTTTCAGGAGatggccataaacaataactggTAATGTTGTATAGTTATAGAAAGGTCTGGATCTCACCTTTCggtaaaacatttttaataaaTTGCTGAGATATACTCACTTGTGAGAACACAAGCTCAATTACATAGTTCAAAtattatgaaaatataaaaaattattaTGAAATGATTTAGTATTTGAGAATATCACAGTGACATGAACCACAATTGTTGGGTACGCTAGACTGTTACTGTTCATATGCCGCCTCCCAGGCTGGGCTCTGTCACTCATAAGCAGAGCGAATCGATTCTTTGTCTGTATAGGCCAGAAAATGTGACATGTCACTCTCTATTCAAATGTGGGGTCTGATACCTGACACTTCAAGTCAGCTCCGTTGAGAGAGTGGTAGCGCAGAGTAGATAGATGGGGCTTTCTGACAATATAAGGTACAGGACCCTAATACCTTCACAGAACGCTTTGTACCCCAAAATCAGTTGGAACATGTCCTGAACCGCTCAAAGTCCCCTATATAGGGGACTTAACATCTTCAAATTAAAACATAGGCCTACTACACAATACTCTGAGccatggtactgtatatgcaaaTCTAGGGTGGGGAACATTAGCCTGGTCccaatctgtttgtgctgtcttgccaactcctatagtCATGTCACTCCAAACAATATTAGCAAAaccacacaaacagatctgggaccaggctagggaaACCCTAAACTGGCTGCAGAGTGTGTGAAGGTTATTGTTACTCAGCTAATGACTGGATGTTTGATTCACTGGATAATGTTGGGATAGTGAGCCATTAAAGAAGTTTTTCCAGGTGTAAATATGGTGCTAAATGGAAAACTGGTCAGATGACTCTGTCCTTATCAAGTCAAATCAACATGGCCATTAAAGCAAGATTGTTCttcaaaatgttcaaatgttcatatatgaccagcagggtcaaataataatctcagtggttgtagagggtgtaaatgtcagtttgcttttcatagctgagcatttagaggtcgagagagagagagagagagagagagagagagggttgaaaactaggtccaggacaaggtagcgTTTATGATTGAAGTATGTATTGAAATTGAATTACACCATTAACCAGCAGAATCTGTGACCCTAAAGGCTCATGGGCTCCTCGCCCCTGCTTCATTTGTATTATCCCTCATTCAAGTCATATACCATGCAGCATCTTTTTCTTTTGTGAGATTAAAACAACTGTAAAGTTTTCATATATATGTTATGCAAATCTTTCAACAAAAACGTAATGTAGAAATGTGCATTAACAATCATGCCTGTAGAGAAATTACTTTTGAAATAAATTGCTATGACTTCA
>XM_036950381.1
gtgagagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaaaagagagagagggtacgGGTCAAAGAGATGAATCGATTGTGTGAAGGCGTGTGtccatgcgtgcgtgtgtgtgaatcaGGGGGTGGGTGCATTAGTGCATGTCAGACAGCAAAGAGAGCCGCAGTTATCTAGGAATCTGAGTCAAAGGAACCTCActaacagagacagggagagagagagtgagagagagagagggagagagaaataggaaagagagaagtggagaggatgAAAGAGGCATGcagatagaaagacagacagagaagaagaagttGAAGTTAACACAGAAATAGAAGAAGGTTATGGGAAAAGTGTGGAGGAACACCATCGAAGGCTTCAAACAAAGCATCAAGCGGAGCAGAAACCCATCAAGAACACCAAAAAATACTCAAAAGAAGAGCGTCACTAAAGACTTGTCGGCACCCAAGTCCAAGAGGCTGGCAAGGCAGAACAGCTTTAAGGTGAAAACCGGTGTCAGGGGGGACAGTAAAAGGAAGAACACAGAGGTGTAGTGTCTGAGAGACTGGATTCTGCCCCGAATTCTGCAGCTTTTCACATTCTTTTAGGAGTCTTCCCATGTTTCCATTAGGCTCTCTCGGCGTGCTCCCCctgctgtccctgtgtgtagGGGCCATGTTGTCCCCCCCGGATGCACCTCCAGCCTGTCCCCACTGCAAGGACAGTCTGGTGGCCGCTCCACCTGCGAGGACAGGGTCAGGGGGGTGTGAGGGACGCCCCGGGATGGCAGGCTGCAGGGTGGCGGTCGTCCCCCTGGCTGCCTCTGACCCCCCTCTGAGGGTGGAACACAGACATGAAGCTCGACAGGTTCAGCCCGAGTCCAGGGATGTGTCGGAGCGTCTGGTCCAGTTGCAGCGCTGTATGAATTCCCTCCAGGAGCCAGGGGTCCCCAGGGGCCGTGTAGGCCAGGGAGGGGACACGCTGGGGGCCATTCTGGCTCTGATGGCTGCAGTACTGACAGAGTGTGACCTACACTGTCACAGTCAGGCCCTCAGGGCTATGGCCAGGCGACTGGAGGGGGCAGcggttgggagagagggagagaaagacctTATACTACTGTTGAGGAGCATCACACAACACCCTCCAACAGCGGTCCCCTCAGCGAGGCTGCATCCTCAGGACTGTGCTGAGATCTATCGTTTGGGGATCAAAGAGAACGGAATCTACACCATCCAGCCTGACCCACGCAGACCTGCAGTGGAGGCAGAGTGTGACATGGAGACAGCAGGTGGGGGGTGGACAGTGTTCCAGCGTCGGCGAGATGGCTCGGTGGACTTCAACCGGACGTGGCAGGAGTACCGCGAGGGTTTTGGTTCCCCACAGGGAGAATACTGGCTGGGGAACGCAGCGCTGCATGCTCTCACCAACACTGGTCAACACCTGCTGCGTATACAACTGGAGGACTGGCACCAGCAGAAACGCCAAGCCACCTACAACACTTTCAGAGTGGCAGCAGAGGCACAGAGGTACCGTCTGACAGCACGGGAGTACTCTGGTGACGCGGGCAATGCCCTGAGCTACAGCAAACGCTACAACCACGACGGCCGAGCTTTCAGCACCAACGACCGTGACCACGATCGCTACACGTCAGGGAACTGTGCGGAGTACTATGGTGCAGGCTGGTGGTTCGACGCCTGCCTGGCGTCTAACCTGAATGGACTCTTCTACCGCGGGCGCTACAGCGGGCTGACTAATGGCATATACTGGGGCACCTGGTACATCCTGACAGACATTCACAGCGGAGAGCGCTACTCCTTTAAGAGTGTGGAGATGAAGACACGCCCACGCAACTTCTAATGAAGACTGACCTGGGAGCTAGTAGAAAAACAGACCCAAACAGAATCTTTTTTCAGGAGatggccataaacaataactggTAATGTTGTATAGTTATAGAAAGGTCTGGATCTCACCTTTCggtaaaacatttttaataaaTTGCTGAGATATACTCACTTGTGAGAACACAAGCTCAATTACATAGTTCAAAtattatgaaaatataaaaaattattaTGAAATGATTTAGTATTTGAGAATATCACAGTGACATGAACCACAATTGTTGGGTACGCTAGACTGTTACTGTTCATATGCCGCCTCCCAGGCTGGGCTCTGTCACTCATAAGCAGAGCGAATCGATTCTTTGTCTGTATAGGCCAGAAAATGTGACATGTCACTCTCTATTCAAATGTGGGGTCTGATACCTGACACTTCAAGTCAGCTCCGTTGAGAGAGTGGTAGCGCAGAGTAGATAGATGGGGCTTTCTGACAATATAAGGTACAGGACCCTAATACCTTCACAGAACGCTTTGTACCCCAAAATCAGTTGGAACATGTCCTGAACCGCTCAAAGTCCCCTATATAGGGGACTTAACATCTTCAAATTAAAACATAGGCCTACTACACAATACTCTGAGccatggtactgtatatgcaaaTCTAGGGTGGGGAACATTAGCCTGGTCccaatctgtttgtgctgtcttgccaactcctatagtCATGTCACTCCAAACAATATTAGCAAAaccacacaaacagatctgggaccaggctagggaaACCCTAAACTGGCTGCAGAGTGTGTGAAGGTTATTGTTACTCAGCTAATGACTGGATGTTTGATTCACTGGATAATGTTGGGATAGTGAGCCATTAAAGAAGTTTTTCCAGGTGTAAATATGGTGCTAAATGGAAAACTGGTCAGATGACTCTGTCCTTATCAAGTCAAATCAACATGGCCATTAAAGCAAGATTGTTCttcaaaatgttcaaatgttcatatatgaccagcagggtcaaataataatctcagtggttgtagagggtgtaaatgtcagtttgcttttcatagctgagcatttagaggtcgagagagagagagagagagagagagagagagggttgaaaactaggtccaggacaaggtagcgTTTATGATTGAAGTATGTATTGAAATTGAATTACACCATTAACCAGCAGAATCTGTGACCCTAAAGGCTCATGGGCTCCTCGCCCCTGCTTCATTTGTATTATCCCTCATTCAAGTCATATACCATGCAGCATCTTTTTCTTTTGTGAGATTAAAACAACTGTAAAGTTTTCATATATATGTTATGCAAATCTTTCAACAAAAACGTAATGTAGAAATGTGCATTAACAATCATGCCTGTAGAGAAATTACTTTTGAAATAAATTGCTATGACTTCA

Function

NR:

description
fibroleukin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950380.1 False 3330 mRNA 0.49 6 61887592 61894193
XM_036950381.1 True 3294 mRNA 0.49 6 61887592 61894193

Neighbor

gene id symbol gene type direction distance location
LOC110494292 LOC106565557 coding upstream 36567 61816490 ~ 61851025 (+)
LOC110494291 NA coding upstream 73936 61809932 ~ 61813656 (+)
LOC110494290 LOC106565558 coding upstream 83522 61795044 ~ 61804070 (+)
si:dkey-197j19.5 efcab12 coding upstream 123495 61748711 ~ 61764097 (+)
LOC110495184 NA coding upstream 141554 61744952 ~ 61746038 (+)
LOC110494299 LOC106565550 coding downstream 27487 61921680 ~ 61933847 (+)
LOC110494300 ruvb1 coding downstream 168406 62062599 ~ 62071924 (+)
ghrl ghrl coding downstream 315829 62210022 ~ 62254810 (+)
LOC110494308 LOC106565540 coding downstream 388662 62282838 ~ 62286838 (+)
LOC110494317 LOC106565535 coding downstream 511220 62405413 ~ 62417692 (+)
G1472696 LOC103358720 non-coding upstream 22084 61860347 ~ 61865508 (+)
G1472595 NA non-coding upstream 132035 61692929 ~ 61755557 (+)
LOC110494287 NA non-coding upstream 173158 61708686 ~ 61714434 (+)
G1472611 NA non-coding upstream 183579 61703608 ~ 61704013 (+)
G1472762 NA non-coding downstream 134097 62028290 ~ 62112728 (+)
G1472820 NA non-coding downstream 211819 62106012 ~ 62107436 (+)
G1472883 NA non-coding downstream 320130 62214323 ~ 62215572 (+)
G1472961 LOC106565537 non-coding downstream 462729 62356922 ~ 62359002 (+)
LOC110494283 LOC106565563 other upstream 330554 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 888529 60972478 ~ 60999063 (+)
G1470607 NA other upstream 1783585 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3379707 58507297 ~ 58507885 (+)
G1467219 NA other upstream 4273292 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 804310 62698503 ~ 62698815 (+)
G1473177 NA other downstream 816146 62710339 ~ 62711136 (+)
G1474159 NA other downstream 1322755 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 1764251 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 1789897 63684043 ~ 63691033 (+)

Expression


Co-expression Network