Item | Value |
---|---|
gene id | ghrl |
gene name | ghrl |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 62210022 ~ 62254810 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
ghrl | Predicted to enable growth hormone-releasing hormone activity. Acts upstream of or within several processes, including chordate embryonic development; regulation of response to food; and response to food. Predicted to be located in extracellular region. Is expressed in several structures, including diencephalon; digestive system; ghrelin secreting cell; heart; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in diabetic neuropathy; esophagus adenocarcinoma; morbid obesity; obesity; and type 2 diabetes mellitus. Orthologous to human GHRL (ghrelin and obestatin prepropeptide). |
description |
---|
ghrelin isoform X2 |
id | name | namespace |
---|---|---|
GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
GO:0030252 | growth hormone secretion | biological_process |
GO:0005576 | extracellular region | cellular_component |
GO:0016608 | growth hormone-releasing hormone activity | molecular_function |
GO:0001664 | G protein-coupled receptor binding | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021567407.2 | False | 823 | mRNA | 0.49 | 7 | 62210022 | 62254799 |
XM_021567408.2 | False | 813 | mRNA | 0.49 | 7 | 62210023 | 62254799 |
XM_021567406.2 | False | 625 | mRNA | 0.49 | 5 | 62244150 | 62254799 |
NM_001124588.2 | False | 529 | mRNA | 0.49 | 5 | 62251539 | 62254809 |
XM_021567409.2 | True | 516 | mRNA | 0.49 | 5 | 62251544 | 62254810 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110494300 | ruvb1 | coding | upstream | 138098 | 62062599 ~ 62071924 (+) |
LOC110494299 | LOC106565550 | coding | upstream | 276175 | 61921680 ~ 61933847 (+) |
si:ch211-157b11.8 | LOC106565551 | coding | upstream | 315829 | 61887592 ~ 61894193 (+) |
LOC110494292 | LOC106565557 | coding | upstream | 358997 | 61816490 ~ 61851025 (+) |
LOC110494291 | NA | coding | upstream | 396366 | 61809932 ~ 61813656 (+) |
LOC110494308 | LOC106565540 | coding | downstream | 28045 | 62282838 ~ 62286838 (+) |
LOC110494317 | LOC106565535 | coding | downstream | 150603 | 62405413 ~ 62417692 (+) |
LOC110493234 | NA | coding | downstream | 171734 | 62426544 ~ 62433065 (+) |
LOC110494314 | LOC106565532 | coding | downstream | 217121 | 62471931 ~ 62491150 (+) |
LOC110494318 | rheb | coding | downstream | 237161 | 62491971 ~ 62496531 (+) |
G1472762 | NA | non-coding | upstream | 97294 | 62028290 ~ 62112728 (+) |
G1472820 | NA | non-coding | upstream | 102586 | 62106012 ~ 62107436 (+) |
G1472701 | NA | non-coding | upstream | 269545 | 61878581 ~ 61940477 (+) |
G1472625 | LOC106565554 | non-coding | upstream | 311514 | 61867645 ~ 61898508 (+) |
G1472696 | LOC103358720 | non-coding | upstream | 344514 | 61860347 ~ 61865508 (+) |
G1472961 | LOC106565537 | non-coding | downstream | 102112 | 62356922 ~ 62359002 (+) |
G1472966 | LOC106565537 | non-coding | downstream | 113033 | 62367843 ~ 62370614 (+) |
G1473067 | NA | non-coding | downstream | 296990 | 62551800 ~ 62552243 (+) |
G1473082 | NA | non-coding | downstream | 310939 | 62565749 ~ 62566066 (+) |
LOC110494283 | LOC106565563 | other | upstream | 652984 | 61555873 ~ 61558328 (+) |
G1471723 | LOC100380707 | other | upstream | 1210959 | 60972478 ~ 60999063 (+) |
G1470607 | NA | other | upstream | 2106015 | 60101892 ~ 60104007 (+) |
G1469076 | NA | other | upstream | 3702137 | 58507297 ~ 58507885 (+) |
G1467219 | NA | other | upstream | 4595722 | 57589865 ~ 57614300 (+) |
G1473171 | LOC106581772 | other | downstream | 443693 | 62698503 ~ 62698815 (+) |
G1473177 | NA | other | downstream | 455529 | 62710339 ~ 62711136 (+) |
G1474159 | NA | other | downstream | 962138 | 63216948 ~ 63217594 (+) |
srsf3b | LOC106565658 | other | downstream | 1403634 | 63658373 ~ 63663255 (+) |
tmcc2 | LOC106565656 | other | downstream | 1429280 | 63684043 ~ 63691033 (+) |