LOC110494317 (LOC106565535)


Basic Information

Item Value
gene id LOC110494317
gene name LOC106565535
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62405413 ~ 62417692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569273.2
AAGAAACCCCGTCGAGGGCCACTATGGGTTCTAAAGGGAATattaattatgtttttttttcaggGGGTACTGATACTGCTGAAGCTTTTAGAAAACTCACAACTGCCCTCAATCGACACAAATAATGTAACTGCACCGTTACCTATCAGCAATTGACTTCTGGGATGCTGGCGGAATGTTTAAGGCGGGCTCTTCGCAGTCATTTCGGCGACACAGGCCCGCGGGTCGACTGCATCGTTATCACCATACTATAACAACACATCAGCCTTAACTGGCGTCAagcctatatatacacacacacacacacacagtaccgcCGAATCTCTATTCGACCGATTGTCTGTGGTGGTAAGTCGTTGGCGCTTGCTGTACTACGGCTTCACGGAAGTTAGTTGGATAGTTTTCCAAAAGTTCGGATTTACAATGAAAGCAAAGACTGGGGTAACCCTAGTCTTGCTAGCTGCTTTCGTTTATGTTGCAGCACAGGAAGGCGAATCCGAGCAAAATGTTGTGGAAGAGTTATTGGTGGAAACCTTGGTAAAACCCGAAACTTGCTCTGTAACGTCAGAAATGGGAGACACGCTACAAATCCACTATACGGGTAAACTACTTGCTGATGGCAAGGTGATTGACTCATCACTGTCCCGGGACCCTCTTGTTGTTGAGCTGGGAAAGAGGACCGTTATCCCTGGTCTGGAACAGAGTTTGGTAGGAGTTTGTGAAGGACAAAAAATCAAGACCACTATTCCACCACACCTTGCCTATGGAAAAAGAGGATACCCTCCAACTATCCCAGCTGATGCTGCTCTAGAGTTTGAGGTGGAGGTGATGTCACTGATCCAGGCAACCCCATGGCAGAAGATGGTGAATGATGTCTTTCCCCTAGTGTGTCTGGGCCTGGTTCCCACTCTGCTGGGTATGGTGGGTCTCTACCTCTATAACAAGGCCAATGCCCAGCGGCCAGGAAAGAAGAAGGCCAAGGACAAGAAGAGCAAGAAGAAGTGAAGGAGACTCTCATAACTATTTAAATAATAAAATTAAAAACAAGGGA

Function

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP11-like

GO: NA

KEGG:

id description
K09576 FKBP11; FK506-binding protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569273.2 True 1051 mRNA 0.47 6 62405413 62417692

Neighbor

gene id symbol gene type direction distance location
LOC110494308 LOC106565540 coding upstream 118575 62282838 ~ 62286838 (+)
ghrl ghrl coding upstream 150603 62210022 ~ 62254810 (+)
LOC110494300 ruvb1 coding upstream 333489 62062599 ~ 62071924 (+)
LOC110494299 LOC106565550 coding upstream 471566 61921680 ~ 61933847 (+)
si:ch211-157b11.8 LOC106565551 coding upstream 511220 61887592 ~ 61894193 (+)
LOC110493234 NA coding downstream 8852 62426544 ~ 62433065 (+)
LOC110494314 LOC106565532 coding downstream 54239 62471931 ~ 62491150 (+)
LOC110494318 rheb coding downstream 74279 62491971 ~ 62496531 (+)
LOC100136666 LOC100136666 coding downstream 89164 62506856 ~ 62528639 (+)
LOC110494319 LOC106565529 coding downstream 158293 62575985 ~ 62649525 (+)
G1472966 LOC106565537 non-coding upstream 34799 62367843 ~ 62370614 (+)
G1472961 LOC106565537 non-coding upstream 46411 62356922 ~ 62359002 (+)
G1472883 NA non-coding upstream 189841 62214323 ~ 62215572 (+)
G1472762 NA non-coding upstream 292685 62028290 ~ 62112728 (+)
G1473067 NA non-coding downstream 134108 62551800 ~ 62552243 (+)
G1473082 NA non-coding downstream 148057 62565749 ~ 62566066 (+)
G1473083 NA non-coding downstream 148402 62566094 ~ 62566299 (+)
G1473085 NA non-coding downstream 150528 62568220 ~ 62568458 (+)
G1473120 NA non-coding downstream 193445 62611137 ~ 62611843 (+)
LOC110494283 LOC106565563 other upstream 848375 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1406350 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2301406 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3897528 58507297 ~ 58507885 (+)
G1467219 NA other upstream 4791113 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 280811 62698503 ~ 62698815 (+)
G1473177 NA other downstream 292647 62710339 ~ 62711136 (+)
G1474159 NA other downstream 799256 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 1240752 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 1266398 63684043 ~ 63691033 (+)

Expression


Co-expression Network