LOC110494318 (rheb)


Basic Information

Item Value
gene id LOC110494318
gene name rheb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62491971 ~ 62496531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569274.2
ACGTGTGTCTTTTTACGACGGTGTGCTTGTCCGGTTTCCGACAGTGTGACTCGCAAAGCGTAACCGCTGTGAATAAGCTGTTTTAGTTTCCTGTTTTACATTCTAAAAACTAATCTTTAGATAATTTCAAACTAATTATCAACAAACATAACTGTACCGATAACCGATATATTGCAATTATCAGTCGAAATACGTGTTCAACCAGCTTCAGTTCTGAAGTTGCAACTCGAGGCCCCTGCGGAGTGTTAGCTCTAGCGGCACTGTAAAGTTTGTTGTTATCACGTGACGTGATACGAATGTGGCGATAAAGTTTTTGTTTCGTTATTAAAACTGCCATACATTTCAACATTGGCTATCTATTGAAGTAACCATTTTAACACAATGCCTCAACCAAAATACAGGAAGATTGCTGTGATTGGGTACAGATCTGTAGGAAAGTCTTCTCTCACAATACAGTTCGTGGAAGGACAGTTCGTAGATTCATATGACCCTACCATTGAAAACACCTTCAACAAAATGGTGTCTGTCAACGGTCAAGACTTCAATCTTCAATTGGTCGATACTGCGGGTCAGGACGAGTACTCTATTTTCCCTCAGTCTCATTCAATGGACATCCATGGTTATGTCTTGGTCTACGCAGTGACTTCCATGAAAAGTTTTGAAGTTGTTCAGGTTCTTCATGACAAGCTTCTAGATATGGTTGGGAAAATACAGGTGCCAACTGTTCTTGTTGGGAACAAAAAAGATCTCCACATGGAAAGGGTGATCAAGCCAGAAGAAGGGAAGAAGCTGGCCGACTCATGGGGAGCAGCGTTCATGGAGTCTTCTGCCAAGGAGAACGAGACCGCTGTAGAGTTATTCAAGCGGATCATTCTGGAGATGGAAAGGGCGGATGGGAACGTTGCCTCAGAAGATAAGAAGTGTGCTGTGATGTAAGAGGGTCTAACCAGGACAGCAGTAAGCTCATTGGCCGAAACCAGGAGACACATCACCACCAGCCTGCCAATCATGACCTCCCCAGCACCAAGGAGCTGCAGTCGCAATGTGGCCATTTATAATTCAATAGTGTTTTGCAAAGGCAGCCAATCACACTCAAGACTGACAAAGGAGAACTCTGAGAGGTGTCACACAAGGGTTTCACTGTCAGTTTTACTGAATTCTGTCAAGTTTGGTTGGCTTAAACCAAACCCCATGAAAAACAAAACATATGAAAATGCCAAATGTAATGTATGAGCCACAAACTCAAACTTTACACACAAAAAACGTCTCCCTGATAATCTGATAATTGCAATCAACTAGCTAGCCATGCATCAACAGATGGAGCAGTGACTGGCCAGTGTCCCTGACTCTCACTGGCTAGCTTCACCTTGTACACCTCGACTCCTTTTCTCAGGTCATCTGTATACTTCAATGAATACACCGGCCATGGCAGAGAGCCACAGTTCACATTGCTGTTGTAGCAACATTGGAAAGTTGCTATGATTTACAACTGATTAATGTCTTAGTTACAGTATCTTGGAATGAGTTTTCTTTCACACAATACGTGTGTTGCGGAAATACATTTCCTCTTGCATTGGTCTTGGCTAACATTGTTTCACTGTAAAACTTTCAGCAAGTCAACTTCAGGTTACACTTCATCCTTGAACTGTAAATCATGTCATTTAGAAAACAACCATTTTTATTTTCTAGAATACATTTTGATGTTCTTCAGCACTTCTGGTTGGCAGATTGGTCCTcgctcccttcctctctgtgatTTATCTGTCATCTGACCTTAATAATTGAGCTGTAATTATCCAGTAGATGAGGCACCCTTGAATGAAGTTTCAGATTAGAAGAGTGGAAGGGATCAGTTATATTTAAAAGTTGTGGCCTTTTGATCCCAGAGAACTAGAATCCTTAACACAGGTTCGATAGTGTTGTTGGTTATATCCTGAGATAATACAAGTTTGTTTATTCAGCAGCATATTTAATAAAATGTCTGCATATAATTATACAATAATTAAGAATATTATGGACTTGCAGTTTTTGCATTCACTGATAATTCCTTACCACTGTGGACTGCAAACCAGTTCATGGGGACCACAGGATCTGCTGGTTTAGTTTTTGGGTTTTGATTCCAGAAGTGATGTTGGCTTGCTCAAGCTCAATAAGGACGCTGTATGACCCATTAAGacttatacatttagtattgagTCAGGGAATAGCAGCGGTCACACAGTGCTCACCATAACCTGATTTGCGTGTCCACTTTAGCCTTACAAACAGAAGATAAATTAGAAGCCAATGGTTTTTACTGACATTACTTTCATTTATCCACCCTCTAGTatctattatttgttattttgatGTTTTTTGGGGATAGAGTGCTTCTCTTTGAGTAAGTAGtaggttgattgattgataggtGATTGATGGTCAAAGAGAAGCTGGTGATGCTGTGTCTTGTGCCTTACCTTACCCTTCAATACCCCCTTTATTCAACCCACCTGCTTCCCTACCTGACTCAAGGTGCTCTAGTTTTTTTTCCTGTTGCCTTGATCCAATGGGCAAAAACCAGGTGGTGTTGTGCAACCAATATCCCCACGGTCAATGTTAACTCAGAAATCTTGCTGTAAACAGTtttgtatatataaataaatccTTTACTCCATTAAAA

Function

symbol description
rheb Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within positive regulation of TOR signaling and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human RHEB (Ras homolog, mTORC1 binding).

NR:

description
ras homolog enriched in brain

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07208 RHEB; Ras homolog enriched in brain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569274.2 True 2659 mRNA 0.41 8 62491971 62496531

Neighbor

gene id symbol gene type direction distance location
LOC110494314 LOC106565532 coding upstream 821 62471931 ~ 62491150 (+)
LOC110493234 NA coding upstream 58906 62426544 ~ 62433065 (+)
LOC110494317 LOC106565535 coding upstream 74279 62405413 ~ 62417692 (+)
LOC110494308 LOC106565540 coding upstream 205133 62282838 ~ 62286838 (+)
ghrl ghrl coding upstream 237161 62210022 ~ 62254810 (+)
LOC100136666 LOC100136666 coding downstream 10325 62506856 ~ 62528639 (+)
LOC110494319 LOC106565529 coding downstream 79454 62575985 ~ 62649525 (+)
LOC110493236 LOC106583228 coding downstream 251240 62747771 ~ 62760165 (+)
c1galt1b LOC106565526 coding downstream 266951 62763482 ~ 62774441 (+)
LOC110494322 LOC106565525 coding downstream 311126 62807657 ~ 62812224 (+)
G1472966 LOC106565537 non-coding upstream 121357 62367843 ~ 62370614 (+)
G1472961 LOC106565537 non-coding upstream 132969 62356922 ~ 62359002 (+)
G1472883 NA non-coding upstream 276399 62214323 ~ 62215572 (+)
G1472820 NA non-coding upstream 384535 62106012 ~ 62107436 (+)
G1473067 NA non-coding downstream 55269 62551800 ~ 62552243 (+)
G1473082 NA non-coding downstream 69218 62565749 ~ 62566066 (+)
G1473083 NA non-coding downstream 69563 62566094 ~ 62566299 (+)
G1473085 NA non-coding downstream 71689 62568220 ~ 62568458 (+)
G1473120 NA non-coding downstream 114606 62611137 ~ 62611843 (+)
LOC110494283 LOC106565563 other upstream 934933 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1492908 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2387964 60101892 ~ 60104007 (+)
G1469076 NA other upstream 3984086 58507297 ~ 58507885 (+)
G1467219 NA other upstream 4877671 57589865 ~ 57614300 (+)
G1473171 LOC106581772 other downstream 201972 62698503 ~ 62698815 (+)
G1473177 NA other downstream 213808 62710339 ~ 62711136 (+)
G1474159 NA other downstream 720417 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 1161913 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 1187559 63684043 ~ 63691033 (+)

Expression


Co-expression Network