LOC110493235 (LOC106565607)


Basic Information

Item Value
gene id LOC110493235
gene name LOC106565607
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62553978 ~ 62560017 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567502.2
ATGGCCACCGTGAAGAATTCTGTGTCCGAGGACCCCCTCCTAGGCAAAGGGCCTGACGAAGACGCCTCAGAGGTGTCTTTGTCAGAAAGTGAGTCGGATTCTGGGAGTGTCCTCTCAGATGACTCAGTGCTTCCAGACTACCAGCAGGAAGGTGGTTCACGGGGCACCGCCAACACGCTGTATGAGGCGTGTGCTCGGAACAACACCCTGGCACTCCGGAAGGTTCTGGAGAGAGGGGTTACCAAAGAGGAGGTCATGAAGGTGGACCACAATGGTTGGACCGGTCTGATGGTGGCGTGCTATAAGGGTTTTTTGGAAATTGTGCAACATCTTCACCACTGTCCCTACCTGGACATAAATCACCAGGACAACGATGGCAACACTGCACTGATGATCGCTTCACAAGCAGGTCACACCATTACAGTGACCTACATCCTCAACTACTACCCCGGAGCAGACACAGAGATCCGGGACTGCCGTGGCTTCACTGCACTCATTAAAGCTGCCATGCAGGGCCGAGACGATGTGGTGTCTTCCCTCATCATGGCCGGAAAGCAATTGTTTTCCTTCTCTGCTATTTCTCTCCCAGGTGCAGACCTAAATGCTGTAGACTCTACGAAGCAGAAGTGTGCGCGGGACTGGGCACTAAAGACGGGTCGCTACGAGACGTTGAACCGCCTCCGCCGCCTCAACCTGCGTCCTAGAGCTGAGCAGTTCGCTGAGAGCTACGTCCCCGAATGGCCAGAGCTGAAGGTGCTGGTGGCCAAGGCCATGGCCAACAAAAGCGCCAGCCAGAAGATCACCCAGCGCATCAAGTCCACCTTCGGCTTCAACTTTCCCCGAGATCCCCAGGAAAACGGGGTCTTGGACCACATGGTGCGTATCACCACCAGCATCCACAGCCCTCTAGTGGCCACCGGCTGCCGGCCCCTCTGCCCCACCAGCCCCCCTGAAGTGGGGAAGAGGCGCCTGGCCGTGCCAGAGCTGGCGAAGAAGCATTCAGAGAAGGAGCTGGGGGAGAGCTCTGTGTGCCACAGCAATGGCTCCGTATCCTCCATCATTCCCCACATCCACTCAGCCGAGACCATCGCCACGTCCTGCTGTGTGGACACAGAGCGCAGGGGCAGCATAATCTCTATAGCTTCCACCGGGGTGCGCACCTTCATCCCCAGGCACATGGCCCACAGGAACAGTGTGTTCCCCTCTGGCTGCATCCCAAAGATCCAGATAGTCAAGTCTGGAGAGCCCACGCctaagaaggagaagaagaggaagaggcacAAGGGTCATCTGGAGCCGCCCATATGGAAGTACAAGGCAGAGaaacaggagaagaagaaggcagagaaagaaaaagagaagacCAAGAAGGAAaagaaacagaagaaacagaagaagtgA

Function

NR:

description
ankyrin repeat domain-containing protein 33B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567502.2 True 1401 mRNA 0.56 4 62553978 62560017

Neighbor

gene id symbol gene type direction distance location
LOC110494313 LOC106565530 coding downstream 4339 62531079 ~ 62549639 (-)
LOC110494312 LOC106565533 coding downstream 95393 62437815 ~ 62458585 (-)
LOC110494311 LOC106565537 coding downstream 162072 62356878 ~ 62391906 (-)
LOC110494315 LOC106565538 coding downstream 202262 62333800 ~ 62351716 (-)
LOC110494310 NA coding downstream 224764 62327517 ~ 62329214 (-)
LOC110495185 LOC106565606 coding upstream 90671 62650688 ~ 62653187 (-)
LOC110494320 LOC106565528 coding upstream 109198 62669215 ~ 62695066 (-)
LOC110494324 gpr84 coding upstream 280259 62840276 ~ 62845145 (-)
LOC110494325 LOC106565522 coding upstream 288952 62848969 ~ 62918172 (-)
LOC110494326 LOC106565520 coding upstream 375346 62935363 ~ 62939851 (-)
G1473734 NA non-coding downstream 48932 62504479 ~ 62505046 (-)
LOC110494301 LOC106565546 non-coding downstream 471735 62081247 ~ 62100547 (-)
G1473420 LOC106565550 non-coding downstream 626233 61923577 ~ 61927745 (-)
G1473389 NA non-coding downstream 702448 61817749 ~ 61851530 (-)
G1473767 NA non-coding upstream 14717 62574734 ~ 62574962 (-)
G1473803 NA non-coding upstream 69751 62629768 ~ 62630862 (-)
G1473816 NA non-coding upstream 99297 62659314 ~ 62659639 (-)
G1473840 NA non-coding upstream 140977 62700994 ~ 62701250 (-)
ccdc174 NA other downstream 303340 62246379 ~ 62250654 (-)
G1471564 NA other downstream 1914643 60638180 ~ 60639335 (-)
G1471219 srgap3 other downstream 2177386 60375633 ~ 60376864 (-)
LOC110494257 LOC106565586 other downstream 2446791 60104033 ~ 60110249 (-)
LOC110494253 LOC106565590 other downstream 2557652 59990975 ~ 59999740 (-)
G1473866 NA other upstream 170136 62730153 ~ 62730503 (-)
G1474395 NA other upstream 488622 63048639 ~ 63100752 (-)
G1474425 LOC106565679 other upstream 573808 63133825 ~ 63145087 (-)
LOC110494346 LOC106565668 other upstream 846888 63403851 ~ 63409818 (-)
G1474741 LOC100136012 other upstream 950099 63510116 ~ 63510543 (-)

Expression


Co-expression Network