Gene
RNA
| Item | Value |
|---|---|
| gene id | tsfm |
| gene name | LOC106565519 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62956724 ~ 62958969 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| elongation factor Ts, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003746 | translation elongation factor activity | molecular_function |
| id | description |
|---|---|
| K02357 | tsf, TSFM; elongation factor Ts |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021569288.2 | True | 1224 | mRNA | 0.50 | 6 | 62956724 | 62958969 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stat2 | stat2 | coding | upstream | 116804 | 62826568 ~ 62839920 (+) |
| LOC110494322 | LOC106565525 | coding | upstream | 144500 | 62807657 ~ 62812224 (+) |
| c1galt1b | LOC106565526 | coding | upstream | 182283 | 62763482 ~ 62774441 (+) |
| LOC110493236 | LOC106583228 | coding | upstream | 196559 | 62747771 ~ 62760165 (+) |
| LOC110494319 | LOC106565529 | coding | upstream | 307199 | 62575985 ~ 62649525 (+) |
| myl6 | LOC106565518 | coding | downstream | 1120 | 62960089 ~ 62968544 (+) |
| pfkmb | LOC106565515 | coding | downstream | 145626 | 63104595 ~ 63121550 (+) |
| itgb7 | LOC106583060 | coding | downstream | 165919 | 63124888 ~ 63141041 (+) |
| espl1 | espl1 | coding | downstream | 200094 | 63159063 ~ 63188421 (+) |
| pfdn5 | pfdn5 | coding | downstream | 229526 | 63188495 ~ 63194667 (+) |
| G1474003 | NA | non-coding | upstream | 16843 | 62937284 ~ 62939881 (+) |
| G1473992 | NA | non-coding | upstream | 36810 | 62919681 ~ 62919914 (+) |
| G1473985 | NA | non-coding | upstream | 51368 | 62904892 ~ 62905356 (+) |
| G1473981 | NA | non-coding | upstream | 59177 | 62897156 ~ 62897547 (+) |
| G1473967 | NA | non-coding | upstream | 74474 | 62882023 ~ 62882250 (+) |
| G1474022 | NA | non-coding | downstream | 12562 | 62971531 ~ 62974394 (+) |
| G1474024 | smarcc2 | non-coding | downstream | 20431 | 62979400 ~ 62979798 (+) |
| G1474026 | NA | non-coding | downstream | 22242 | 62981211 ~ 62982389 (+) |
| G1474055 | NA | non-coding | downstream | 76372 | 63035341 ~ 63035732 (+) |
| G1474113 | NA | non-coding | downstream | 174794 | 63133763 ~ 63134241 (+) |
| G1473177 | NA | other | upstream | 245588 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 257909 | 62698503 ~ 62698815 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 1399686 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1957661 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2852717 | 60101892 ~ 60104007 (+) |
| G1474159 | NA | other | downstream | 257979 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 699475 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 725121 | 63684043 ~ 63691033 (+) |
| G1475820 | NA | other | downstream | 1604405 | 64563374 ~ 64565146 (+) |
| LOC110494386 | LOC106565630 | other | downstream | 1649285 | 64608194 ~ 64625111 (+) |
