myl6 (LOC106565518)


Basic Information

Item Value
gene id myl6
gene name LOC106565518
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 62960089 ~ 62968544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569289.2
GATGTGATTGGTTTGTACAGTGCATGAATTAAGGATGACGTCATGAGCATAGTTTTCTTAACGTTCGCGTCTATCGGTCTACATTCCCCTGACCTCCGCCCGTTGACAGGATTCGAACCAAGCCCAGAAATGTCTGACTTCTCAGAAGACCAGATCATTGAGTTCAAGGAGGCCTTCCTGCTGTTTGACAGGACGGGCGATGGGAAGATCAGCTACAGCCAGTGTGGTGATGTCATGCGGGCCCTCGGCCAGAACCCCGTCAACGCTGAGGTCCTCAAGGTCCTGGGCAACCCCAAGTCAGAAGAAATGAACCACAAAATGCTGGACTTTGAGCAGTTCCTGCCCATGCTACAGGCCATCGCTAAAAACAAGGACCAGGGCTCCTTTGAGGACTTTGTGGAGGGTCTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTGATGGGCGCTGAGCTGCGCCACGTCCTCACAACACTCGGTGAGAAAATGacagaagaggaggtggagactCTGTTAGCAGGACACGAAGATGCCAACGGCTGCATCAACTACGAAGaACTCGTCCGGATGGTGATGAGTGGTTGAAGATTAAGAACACATCCGGATCACTTTATtcccaaatgttttttttcttctattatATACGCAACGTCTGTCTCACCCCCATCCACTGTCATTCCCCACCCAACTCTTGTTATCCCTCGTTTTGtcatattttttgtattttctttcagAAGTGCCTTTTCTGTGTCTGAGTTGAAGAGCCccttttcatttcacttcaaaaTATCATCCAACCACGGAGGCGCATGCTATCATGCCTGGCTCGTGGACAGAATCGGCAATAACATTCCCTGGATTATTCCATACATTCCCATCACCCACCCTGTCACTCAACCCTTGTCAGCCCCACCACCAAATAGCTGTTTTTTTTATACGGAGGAGATGCATGTTCATTGGCTGAGACCATGCTGTAATGTGGGTTTTACCAGGCCAACCAACCAATCATGAAATTACAGATTTACTGTCATGTATATGTTATAACGAACGGTATTTAATAAAAATCCCCAGTTTCTGAAA
>XM_021569290.2
GATGTGATTGGTTTGTACAGTGCATGAATTAAGGATGACGTCATGAGCATAGTTTTCTTAACGTTCGCGTCTATCGGTCTACATTCCCCTGACCTCCGCCCGTTGACAGGATTCGAACCAAGCCCAGAAATGTCTGACTTCTCAGAAGACCAGATCATTGAGTTCAAGGAGGCCTTCCTGCTGTTTGACAGGACGGGCGATGGGAAGATCAGCTACAGCCAGTGTGGTGATGTCATGCGGGCCCTCGGCCAGAACCCCGTCAACGCTGAGGTCCTCAAGGTCCTGGGCAACCCCAAGTCAGAAGAAATGAACCACAAAATGCTGGACTTTGAGCAGTTCCTGCCCATGCTACAGGCCATCGCTAAAAACAAGGACCAGGGCTCCTTTGAGGACTTTGTGGAGGGTCTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTGATGGGCGCTGAGCTGCGCCACGTCCTCACAACACTCGGTGAGAAAATGacagaagaggaggtggagactCTGTTAGCAGGACACGAAGATGCCAACGGCTGCATCAACTACGAAGTCTTTGTCCGCCACATCATGTCCGGCTGAGCGGCGAaACTCGTCCGGATGGTGATGAGTGGTTGAAGATTAAGAACACATCCGGATCACTTTATtcccaaatgttttttttcttctattatATACGCAACGTCTGTCTCACCCCCATCCACTGTCATTCCCCACCCAACTCTTGTTATCCCTCGTTTTGtcatattttttgtattttctttcagAAGTGCCTTTTCTGTGTCTGAGTTGAAGAGCCccttttcatttcacttcaaaaTATCATCCAACCACGGAGGCGCATGCTATCATGCCTGGCTCGTGGACAGAATCGGCAATAACATTCCCTGGATTATTCCATACATTCCCATCACCCACCCTGTCACTCAACCCTTGTCAGCCCCACCACCAAATAGCTGTTTTTTTTATACGGAGGAGATGCATGTTCATTGGCTGAGACCATGCTGTAATGTGGGTTTTACCAGGCCAACCAACCAATCATGAAATTACAGATTTACTGTCATGTATATGTTATAACGAACGGTATTTAATAAAAATCCCCAGTTTCTGAAA

Function

NR:

description
myosin light polypeptide 6-like isoform X2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569289.2 False 1080 mRNA 0.48 6 62960089 62968544
XM_021569290.2 True 1116 mRNA 0.48 7 62960089 62968544

Neighbor

gene id symbol gene type direction distance location
tsfm LOC106565519 coding upstream 1120 62956724 ~ 62958969 (+)
stat2 stat2 coding upstream 120169 62826568 ~ 62839920 (+)
LOC110494322 LOC106565525 coding upstream 147865 62807657 ~ 62812224 (+)
c1galt1b LOC106565526 coding upstream 185648 62763482 ~ 62774441 (+)
LOC110493236 LOC106583228 coding upstream 199924 62747771 ~ 62760165 (+)
pfkmb LOC106565515 coding downstream 136051 63104595 ~ 63121550 (+)
itgb7 LOC106583060 coding downstream 156344 63124888 ~ 63141041 (+)
espl1 espl1 coding downstream 190519 63159063 ~ 63188421 (+)
pfdn5 pfdn5 coding downstream 219951 63188495 ~ 63194667 (+)
LOC110494337 LOC106565677 coding downstream 227535 63196079 ~ 63201204 (+)
G1474003 NA non-coding upstream 20208 62937284 ~ 62939881 (+)
G1473992 NA non-coding upstream 40175 62919681 ~ 62919914 (+)
G1473985 NA non-coding upstream 54733 62904892 ~ 62905356 (+)
G1473981 NA non-coding upstream 62542 62897156 ~ 62897547 (+)
G1473967 NA non-coding upstream 77839 62882023 ~ 62882250 (+)
G1474022 NA non-coding downstream 2987 62971531 ~ 62974394 (+)
G1474024 smarcc2 non-coding downstream 10856 62979400 ~ 62979798 (+)
G1474026 NA non-coding downstream 12667 62981211 ~ 62982389 (+)
G1474055 NA non-coding downstream 66797 63035341 ~ 63035732 (+)
G1474113 NA non-coding downstream 165219 63133763 ~ 63134241 (+)
G1473177 NA other upstream 248953 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 261274 62698503 ~ 62698815 (+)
LOC110494283 LOC106565563 other upstream 1403051 61555873 ~ 61558328 (+)
G1471723 LOC100380707 other upstream 1961026 60972478 ~ 60999063 (+)
G1470607 NA other upstream 2856082 60101892 ~ 60104007 (+)
G1474159 NA other downstream 248404 63216948 ~ 63217594 (+)
srsf3b LOC106565658 other downstream 689900 63658373 ~ 63663255 (+)
tmcc2 LOC106565656 other downstream 715546 63684043 ~ 63691033 (+)
G1475820 NA other downstream 1594830 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 1639710 64608194 ~ 64625111 (+)

Expression


Co-expression Network