LOC110494417 (LOC106565918)


Basic Information

Item Value
gene id LOC110494417
gene name LOC106565918
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66391396 ~ 66401187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569426.2
AAGCTATTTCTTTAAGAGTTGAGTGAAAGGCGGAGCCAGAGTATATTCTTGTAGCGTGGTGGAGCTTAAAAGAACATCACTCACAACAATAGTATTATTGAGTAGTCTCTCAGAACATAAAGAATAGTTACTGTACCAAATGCGTTGTCCTTTATTTCTCCTCAGTACAATAGCAGACTGAAGCTTGTAAATTGGGCTATACTAAACGTCTACGGCAAAACACGGGAAGTAGAACTGTCGCCAGAAGAGGATTCTTAACGTTTCTACGTAACAGCTGAGGAAAACTGCGAGGTTGTAAGGTCCAGCAGTAGCAGCCAGCTGGGCGAGCCGAGTGTTTCCTGGCTTTGATGCGACCCGATTGTGCCTGGAGCATGTGCACAGCGGGCCTGACTGCCCAGGAGATCTGTTTACCTGCAGACAGCCCCTTCCTGCGGACCAGTCACTGTCTCAGCATGGCTGAAGCCAAGCCCTCATGGAGCCACCGCCATGAGCTGGACAAGTAAGTCCCAACCTTGTACTTCAGTATGGATCCAGCACCAACAGAATACAACTTTCGATTTCAGCAGCAGGTGCCACCATCGCTCAATTCTGAGAGACAGAAACATAGCCCTGGTGCACAGTGGTTACCCCCAAAGAAATCCCGTCCCACTCATCTGTCCCTGTCATCCAGCACTGAGCCCTCCACCCCTAGCCCTGCTGAGGATGACCAGGTGGTCCCTTCCTTCCAGAGGTTGTCTGTGTACGAACACTGCAGTCCCCCCCACACACCTAGCCGGGGGGCCAAacccctgcctcctctccctgGGCGGGCAGACCTTTCCCCTGACCAGGCCATGGACAATGAGGTGGAGTTCTTCACCAGTTCAGATGACCGACGCTGCTTGGTGCCTGAGCAGTGTCACCCCAAACCCTCTGCCTTTCGCTATGGAGCCCCCAGCCGCAGGAGCTTCAGGGGCTGTGGGCAGATTAACTATGCCTACTTTGAGGGACCTGCGGGGCAGCAAAGACAACaggaacagaaggagcagcagcgGGTACAGGAACAACAGCGGGTACAGGAACAACAGCGGGTACAGGAACAACAGCGGCAACAGCACGAGCAGCAGGAACAGCAACAGAGGTTGGAGCAGGAGGTGCGGGAGCAAGCAGAGCAGCAGCCAGTGTGTCCCAGACAGCAGGACCGAGCCCAGAGGAAGCTGCGGCGCTCTCACTCTGGCCCTGCTGGCTCCTTCAACAAGCCCACGTCGCTGCGCCTGCCCTGTCATCACCGCCACACTCAGGGCATGGACAAACCAATGGTGCCCCCCCGCGTGCCCATCCCCCCACGGCCCATCAAGACTGCAGACTACCGCCGCTGGTCAGCCGAGGTGTCCTCTGGGGCCTACAGTGATGAGGACAAGCCCCCGAAGGTGCCCCCTAGGGACCCTTTGTTGTCTCAAGGCAGCTCCCGTACCCCCAGCCCCAAGAGCCTCCCCTCGTACCTTAACGGTGTTATGCCCCCAACACAGAGCTTTGCCCCAGACCCTAAGTACGTGAGCTGGGGTTTACAGAGGCAGAACAGTGAGGGGTCTCCCTGCATCCTGCCTGTCATGGAGAACGGCAGGAAGGCCAGCACCACACACTACTTCCTGCTCCCACAGAGGCCGGCCAACCTGGACAAACCTTACCCGGAGAAGATACTCCAGTATGTGGACTGCCCGGCAGGTCGCAATAGGGGGGCTTCAGACCCAGAATGGGATTGTCAGACCAAGAGGAAAGTACAGGTGGATATAGTTTGACCCGGAGGAGACAAATTAGGGAAGAACTCCAGTGGACACACGCAATCAACCACTGGGGACACAGTGCCTCAGGACGCTGAGGCCTTCAAACACTTACTGCTGCTTTAACACTGACGACTTCGGTAGTTTTTACCTTGCTATTCTAAAAACATATGGGTATTTGACGTACCATTTACAGTTACTGGGACTTTAGGAACTGCAACTACAACAAAGATGCATGAGCTAAATGATTTCTCTAACTATTGAGTGTGTGGGTAATATGTAACAATTTTTAGTTTGTTTTATATGATTTAATATTTTAGTACATTGAGTATATGGAAATGTTTTTCTGATAGTGGTGCAGTTAGCGTATAAGCTGCCTCAAGttctcagtggtgtgtgtgtgtgtgtgtcacatgtaTAGGATGTTTTGTGAGTTGTATGTTGTGTTTTTGATATTGCTTTTGTGTCTCAGAACTTGGGGACAAAGGGTCAGTAAAGCAATCATAATCTCCTATTGCATATATGAAGTCTAAAGAAGAGGCCAATGTATTGAAACACTTTATGAAGGATTCTCCACCCACATCCCCATTCTAACTCCTATTATGTATAAGCATGAATATAGGAATGCACATATGTTTCCTGCCTTGTTGATATTTCAGTCTTACTCAGGCCACTATGTTTATGAATGGAagtgtatttctgtgtttcccTCACTGGATGTACACTCTGTACCCGTGGGAGAGTGGAATAATGGTATGCCTGTCTCCAGTGGAATGTCTAGTGCAGTTTGTACTTTGTgttaggcgtgtgtgtgtgcgtggtgcaACTGTGTTCGTGTTTTCCCTGCTGATTTTGTGACTTTTCTACCATATCGTAGAAAACTAGGTTAACAATATTTGTTACTGTTCTCTTCCTGTTTTCAACACTGCTGCCAAATACACGGTCGTAAAGAGAATCCTCCCTAACCCTTGTGCTACTTTCAGTGTCCAGGTCATTTTGTGttgcacaaaaaaaatgtgcCTGTTGAACATATGTGAATGTATGATTTTCTTACTGTTTGGGCAGCTCAGTAGCTGGTCAAGCTGGGAGTCATTGTCTGTCACTAATTGTCTTCAATACTACCTCCCCAATGACAATACAAATCAATATATACCCAAAAACCTTGTGGAACGTAATCCTAAAATAATTTGAATTGAAACCTCTAAATTAAAACTGAAACATTGCCAAATATTTCTCAAACGCCCTCAGTGAAAATATGATTAAAATCCAAACCACTACTTCACTTAACATAGTCCATTTACCATATTTCAGAATTACAAACCGAATGACCGGACCTTTCATTTGACATTATTTCGACTACACCAAGTGATCGTGGATCCCAGAGACGTTGGGCTCACCTGATAACACAGACATATTATGCTTGACTGTGTGGGGCTTACCTACCTGAAACGGACTTTCCTGTTCTGCTAATGCATTCCTGCCTGACATGATTGCAGTGGGTGTGGTCCAGAGACTTTGGCTGCTGGCGGCCAGGAAATGATATGGATTTTATTGTAATAGATTATTCAAGAATCATAATGATGACATAGTGAATTTAGCAAGTGCATCGAAGTAACCCTGGATGGTGGTTGAATTGGATAGCAGATTAGCTCTACAGTCAAATGGTCACttaagtacattttccctcaaagGGAAAACAAAGCTAGTAGAGGCCGTGTCGTTTTCTATTTAATGTATAATACATTGTTTACATTGTACACTGATAGGTTATTTAATCTTAACCTATTCCCATGTCTTATCGGAAACAATGAAATCAAATGAAGACTAGTTCATCGAGAATAATTGACATTATCTGCTGTGGTGAAACAAATGCACTGGCAGTAAAGAACATGATACTGTGTTTATTTAACATAAATATACTAGTCATTATGAATATTTGATCAATGTATCAGTCTTTTAAAGGGAAAAATAAAATGACTTATTTATGAA
>XM_021569425.2
ATTTCTTTAAGAGTTGAGTGAAAGGCGGAGCCAGAGTATATTCTTGTAGCGTGGTGGAGCTTAAAAGAACATCACTCACAACAATAGTATTATTGAGTAGTCTCTCAGAACATAAAGAATAGTTACTGTACCAAATGCGTTGTCCTTTATTTCTCCTCAGTACAATAGCAGACTGAAGCTTGTAAATTGGGCTATACTAAACGTCTACGGCAAAACACGGGAAGTAGAACTGTCGCCAGAAGAGGATTCTTAACGTTTCTACGTAACAGCTGAGGAAAACTGCGAGGTTGTAAGGTCCAGCAGTAGCAGCCAGCTGGGCGAGCCGAGTGTTTCCTGGCTTTGATGCGACCCGATTGTGCCTGGAGCATGTGCACAGCGGGCCTGACTGCCCAGGAGATCTGTTTACCTGCAGACAGCCCCTTCCTGCGGACCAGTCACTGTCTCAGCATGGCTGAAGCCAAGCCCTCATGGAGCCACCGCCATGAGCTGGACAACTTGTACTTCAGTATGGATCCAGCACCAACAGAATACAACTTTCGATTTCAGCAGCAGGTGCCACCATCGCTCAATTCTGAGAGACAGAAACATAGCCCTGGTGCACAGTGGTTACCCCCAAAGAAATCCCGTCCCACTCATCTGTCCCTGTCATCCAGCACTGAGCCCTCCACCCCTAGCCCTGCTGAGGATGACCAGGTGGTCCCTTCCTTCCAGAGGTTGTCTGTGTACGAACACTGCAGTCCCCCCCACACACCTAGCCGGGGGGCCAAacccctgcctcctctccctgGGCGGGCAGACCTTTCCCCTGACCAGGCCATGGACAATGAGGTGGAGTTCTTCACCAGTTCAGATGACCGACGCTGCTTGGTGCCTGAGCAGTGTCACCCCAAACCCTCTGCCTTTCGCTATGGAGCCCCCAGCCGCAGGAGCTTCAGGGGCTGTGGGCAGATTAACTATGCCTACTTTGAGGGACCTGCGGGGCAGCAAAGACAACaggaacagaaggagcagcagcgGGTACAGGAACAACAGCGGGTACAGGAACAACAGCGGGTACAGGAACAACAGCGGCAACAGCACGAGCAGCAGGAACAGCAACAGAGGTTGGAGCAGGAGGTGCGGGAGCAAGCAGAGCAGCAGCCAGTGTGTCCCAGACAGCAGGACCGAGCCCAGAGGAAGCTGCGGCGCTCTCACTCTGGCCCTGCTGGCTCCTTCAACAAGCCCACGTCGCTGCGCCTGCCCTGTCATCACCGCCACACTCAGGGCATGGACAAACCAATGGTGCCCCCCCGCGTGCCCATCCCCCCACGGCCCATCAAGACTGCAGACTACCGCCGCTGGTCAGCCGAGGTGTCCTCTGGGGCCTACAGTGATGAGGACAAGCCCCCGAAGGTGCCCCCTAGGGACCCTTTGTTGTCTCAAGGCAGCTCCCGTACCCCCAGCCCCAAGAGCCTCCCCTCGTACCTTAACGGTGTTATGCCCCCAACACAGAGCTTTGCCCCAGACCCTAAGTACGTGAGCTGGGGTTTACAGAGGCAGAACAGTGAGGGGTCTCCCTGCATCCTGCCTGTCATGGAGAACGGCAGGAAGGCCAGCACCACACACTACTTCCTGCTCCCACAGAGGCCGGCCAACCTGGACAAACCTTACCCGGAGAAGATACTCCAGTATGTGGACTGCCCGGCAGGTCGCAATAGGGGGGCTTCAGACCCAGAATGGGATTGTCAGACCAAGAGGAAAGTACAGGTGGATATAGTTTGACCCGGAGGAGACAAATTAGGGAAGAACTCCAGTGGACACACGCAATCAACCACTGGGGACACAGTGCCTCAGGACGCTGAGGCCTTCAAACACTTACTGCTGCTTTAACACTGACGACTTCGGTAGTTTTTACCTTGCTATTCTAAAAACATATGGGTATTTGACGTACCATTTACAGTTACTGGGACTTTAGGAACTGCAACTACAACAAAGATGCATGAGCTAAATGATTTCTCTAACTATTGAGTGTGTGGGTAATATGTAACAATTTTTAGTTTGTTTTATATGATTTAATATTTTAGTACATTGAGTATATGGAAATGTTTTTCTGATAGTGGTGCAGTTAGCGTATAAGCTGCCTCAAGttctcagtggtgtgtgtgtgtgtgtgtcacatgtaTAGGATGTTTTGTGAGTTGTATGTTGTGTTTTTGATATTGCTTTTGTGTCTCAGAACTTGGGGACAAAGGGTCAGTAAAGCAATCATAATCTCCTATTGCATATATGAAGTCTAAAGAAGAGGCCAATGTATTGAAACACTTTATGAAGGATTCTCCACCCACATCCCCATTCTAACTCCTATTATGTATAAGCATGAATATAGGAATGCACATATGTTTCCTGCCTTGTTGATATTTCAGTCTTACTCAGGCCACTATGTTTATGAATGGAagtgtatttctgtgtttcccTCACTGGATGTACACTCTGTACCCGTGGGAGAGTGGAATAATGGTATGCCTGTCTCCAGTGGAATGTCTAGTGCAGTTTGTACTTTGTgttaggcgtgtgtgtgtgcgtggtgcaACTGTGTTCGTGTTTTCCCTGCTGATTTTGTGACTTTTCTACCATATCGTAGAAAACTAGGTTAACAATATTTGTTACTGTTCTCTTCCTGTTTTCAACACTGCTGCCAAATACACGGTCGTAAAGAGAATCCTCCCTAACCCTTGTGCTACTTTCAGTGTCCAGGTCATTTTGTGttgcacaaaaaaaatgtgcCTGTTGAACATATGTGAATGTATGATTTTCTTACTGTTTGGGCAGCTCAGTAGCTGGTCAAGCTGGGAGTCATTGTCTGTCACTAATTGTCTTCAATACTACCTCCCCAATGACAATACAAATCAATATATACCCAAAAACCTTGTGGAACGTAATCCTAAAATAATTTGAATTGAAACCTCTAAATTAAAACTGAAACATTGCCAAATATTTCTCAAACGCCCTCAGTGAAAATATGATTAAAATCCAAACCACTACTTCACTTAACATAGTCCATTTACCATATTTCAGAATTACAAACCGAATGACCGGACCTTTCATTTGACATTATTTCGACTACACCAAGTGATCGTGGATCCCAGAGACGTTGGGCTCACCTGATAACACAGACATATTATGCTTGACTGTGTGGGGCTTACCTACCTGAAACGGACTTTCCTGTTCTGCTAATGCATTCCTGCCTGACATGATTGCAGTGGGTGTGGTCCAGAGACTTTGGCTGCTGGCGGCCAGGAAATGATATGGATTTTATTGTAATAGATTATTCAAGAATCATAATGATGACATAGTGAATTTAGCAAGTGCATCGAAGTAACCCTGGATGGTGGTTGAATTGGATAGCAGATTAGCTCTACAGTCAAATGGTCACttaagtacattttccctcaaagGGAAAACAAAGCTAGTAGAGGCCGTGTCGTTTTCTATTTAATGTATAATACATTGTTTACATTGTACACTGATAGGTTATTTAATCTTAACCTATTCCCATGTCTTATCGGAAACAATGAAATCAAATGAAGACTAGTTCATCGAGAATAATTGACATTATCTGCTGTGGTGAAACAAATGCACTGGCAGTAAAGAACATGATACTGTGTTTATTTAACATAAATATACTAGTCATTATGAATATTTGATCAATGTATCAGTCTTTTAAAGGGAAAAATAAAATGACTTATTTATGAA

Function

NR:

description
ERBB receptor feedback inhibitor 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569426.2 False 3749 mRNA 0.47 4 66391396 66401187
XM_021569425.2 True 3732 mRNA 0.47 4 66391401 66401187

Neighbor

gene id symbol gene type direction distance location
LOC110516128 LOC106565694 coding upstream 741420 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 812452 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 838739 65523697 ~ 65552657 (+)
LOC118940493 NA coding upstream 936566 65453352 ~ 65454830 (+)
LOC110494396 LOC106565619 coding upstream 1376606 64996582 ~ 65014790 (+)
pax7a pax7a coding downstream 64268 66465455 ~ 66527607 (+)
park7 park7 coding downstream 158290 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 165592 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 384329 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 397580 66798767 ~ 66840370 (+)
G1477361 NA non-coding upstream 8811 66382357 ~ 66382585 (+)
G1477359 NA non-coding upstream 10465 66380653 ~ 66380931 (+)
G1477333 LOC106565959 non-coding upstream 51477 66339517 ~ 66339919 (+)
G1477332 NA non-coding upstream 51928 66339203 ~ 66339468 (+)
G1477331 LOC106565959 non-coding upstream 52770 66338270 ~ 66338626 (+)
G1477369 NA non-coding downstream 6096 66407283 ~ 66407572 (+)
G1477370 LOC106565917 non-coding downstream 8021 66409208 ~ 66410103 (+)
G1477371 LOC106565917 non-coding downstream 10605 66411792 ~ 66418996 (+)
G1477379 LOC106565917 non-coding downstream 23098 66424285 ~ 66424652 (+)
G1477378 LOC106565917 non-coding downstream 25473 66426660 ~ 66427037 (+)
G1477313 NA other upstream 100948 66288872 ~ 66290448 (+)
G1476898 NA other upstream 608061 65781779 ~ 65783335 (+)
G1476569 NA other upstream 924629 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1064233 65325877 ~ 65327163 (+)
G1476510 NA other upstream 1087268 65303417 ~ 65304128 (+)
G1477578 LOC100194703 other downstream 155850 66557037 ~ 66557512 (+)
G1477697 NA other downstream 316186 66717373 ~ 66718688 (+)
LOC110494429 LOC106565956 other downstream 466338 66867211 ~ 66867881 (+)

Expression

LOC110494417(LOC106565918) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 80.
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LOC110494417(LOC106565918) Expression in each Bioproject

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LOC110494417(LOC106565918) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
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Co-expression Network