park7 (park7)


Basic Information

Item Value
gene id park7
gene name park7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66559477 ~ 66566440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569442.2
TGTAATTTACGTGTATGAGTGTTCCTGCCAAGATAAAAGTCCTTTCACAAACAGTTGCTTTCCTGTTGCTGACAGTCACACACCCACTCTCTCAAGAATGGCAGGGAAAAAGGCATTAGTAATCCTCTCTAAAGGTGCAGAAGAGATGGAAACAGTTATACCTGTGGACGTAATGCGTAGAGCTGGGATTGCTGTGATGTTGGCAGGGTTGACAGGCAAAGAGCCTGTGCAGTGCAGCAGAGATGTCTACCTTGTTCCTGATGCCAGCCTGGAGGATGCCCGCAAGCAGGGTCCGTATGATGTGGTTTTTCTGCCAGGGGGAGCTCTCGGTGCCCAGCACCTGTCAGAGTCGCCTGCTGTGAAAGAGGTGTTGAAGGACCAGGAGGACAGGAAAGGGCTGATCGCTGCCATCTGTGCAGGTCCCACGGCGCTCCTGGCACACGGTATTGCCTACGGCAGCACAGTCACCACCCACCCTGGTGCCAAGGACAAAATGATGACTGGTGGCCACTACAAGTATTCTGAGGCTCGAGTCCAGAAGGATGGCCATCTGATTACCAGCCGCGGGCCAGGAACCAGCTTTGAGTTTGCCCTGGCCATTGTAGAGGAGCTCATGGGGGCTGAAGTTGCTGCTACTGTCAAAGCACCCCTGGTTCTGAAAGACTGAGTGGTGTTGAGCCTTTCAAACTAAAGCACTGTCAACTAAACCCTAAGTACTCTGCACTGTTCATCATGGTACAAATGCCAATAATTGTGAACAAAGAATAATTATTTACAGGATAATGTGCAATAGTAAGAATATGCATTTTTATTATTGTCTTCTATCCTTCCCTAGGACATGTTGCCCCTGCACTTTAAGCATCAGTGATTTGGGATTGTTATTGCTTTTGTATAGGAAAATCACCAATGTTAAATTGTATTGAtttaaatatcaaatatattgCTGTCTTCACTGTCCAAAAGCACTGATGTAGCTTCATCATTAAAGTCAACTGAGCCCCCTTCAGACTCTTGG

Function

symbol description
park7 Predicted to enable several functions, including hydro-lyase activity; peptidase activity; and protein homodimerization activity. Acts upstream of or within response to oxidative stress. Predicted to be located in mitochondrion. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alar plate midbrain region; digestive system; male organism; musculature system; and nervous system. Used to study Parkinson's disease. Human ortholog(s) of this gene implicated in Parkinson's disease; Parkinson's disease 7; Parkinsonism; cerebral infarction; and middle cerebral artery infarction. Orthologous to human PARK7 (Parkinsonism associated deglycase).

NR:

description
protein deglycase DJ-1zDJ-1-like

GO:

id name namespace
GO:0006914 autophagy biological_process
GO:0006954 inflammatory response biological_process
GO:0070301 cellular response to hydrogen peroxide biological_process
GO:2000277 positive regulation of oxidative phosphorylation uncoupler activity biological_process
GO:0007338 single fertilization biological_process
GO:0006508 proteolysis biological_process
GO:0060548 negative regulation of cell death biological_process
GO:0050821 protein stabilization biological_process
GO:0043523 regulation of neuron apoptotic process biological_process
GO:0005634 nucleus cellular_component
GO:0005739 mitochondrion cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0003729 mRNA binding molecular_function

KEGG:

id description
K05687 PARK7; protein DJ-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569442.2 True 1015 mRNA 0.47 6 66559477 66566440

Neighbor

gene id symbol gene type direction distance location
pax7a pax7a coding upstream 31870 66465455 ~ 66527607 (+)
LOC110494417 LOC106565918 coding upstream 158290 66391396 ~ 66401187 (+)
LOC110516128 LOC106565694 coding upstream 909501 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 980533 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 1006820 65523697 ~ 65552657 (+)
kcnab2a kcnab2 coding downstream 339 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 219076 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 232327 66798767 ~ 66840370 (+)
aldh4a1 LOC106565909 coding downstream 277581 66844021 ~ 66853631 (+)
LOC110494429 LOC106565956 coding downstream 300771 66867211 ~ 66867881 (+)
G1477576 NA non-coding upstream 2941 66556260 ~ 66556536 (+)
G1477570 NA non-coding upstream 7751 66551513 ~ 66551726 (+)
G1477510 NA non-coding upstream 37046 66521122 ~ 66522431 (+)
G1477377 NA non-coding upstream 121015 66430920 ~ 66438462 (+)
G1477381 NA non-coding upstream 131921 66427220 ~ 66427556 (+)
G1477594 NA non-coding downstream 12496 66578936 ~ 66579231 (+)
G1477598 NA non-coding downstream 16479 66582919 ~ 66583146 (+)
G1477601 NA non-coding downstream 20511 66586951 ~ 66587172 (+)
G1477751 NA non-coding downstream 247481 66813921 ~ 66814333 (+)
G1477758 NA non-coding downstream 257386 66823826 ~ 66824068 (+)
G1477578 LOC100194703 other upstream 1965 66557037 ~ 66557512 (+)
G1477313 NA other upstream 269029 66288872 ~ 66290448 (+)
G1476898 NA other upstream 776142 65781779 ~ 65783335 (+)
G1476569 NA other upstream 1092710 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1232314 65325877 ~ 65327163 (+)
G1477697 NA other downstream 150933 66717373 ~ 66718688 (+)
G1478504 NA other downstream 1095547 67661987 ~ 67663649 (+)

Expression


Co-expression Network