LOC110494492 (mx2)


Basic Information

Item Value
gene id LOC110494492
gene name mx2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70747837 ~ 70759905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569608.2
AATCGTTTCCCAGGGATTACTATTTCTACAGATCCTGTACAGCCAGTAGTCAGTTGCAGTGTAGTCAATTGCAATGTATTAAccgttttttttaatttttttatcgcAAATCATGAATTATACGCTGAACCAACATTATGAGGAGAAGGTGCGTCCTAGTATTGACCTCATCGACTCTCTACGCTCCCTTGGCGTAGAGAAGGACCTTGCGCTGCCAGCCATCGCCGTGATAGGGGACCAGAGTTCGGGAAAGAGCTCCGTGCTGGAGGCGCTGTCTGGGGTGGCTTTGCCAAGGGGTAGCGGTATTGTAACACGATGCCCTCTCGAGCtgaagatgaagaggaagaaagaaggagaggaatgGCACGGAAAAATCAGCTACCAGGACCGTGAGGAGGAGATTGAGGATCCCTCTGATGTGGAGAACAAAATTCGGAAAGCCCAGGATGAAATGGCAGGTGTGGGGGTGGGTATCAGTGATGACCTCATCAGCTTGGAGATTGGCTCCCCTGACGTCCCAGACCTCACACTCATCGACTTGCCAGGCATCGCCCGTGTAGCTGTCAAGGGTCAACCTGAGAACATTGGTGAACAGATTAAGAGACTGATACGGAAGTTCATCACAAAGCAAGAAACAATCAACTTCGTGGTTGTGCCATGCAACGTTGACATTGCAACCACAGAGGCTTTGAAGATGGCACAAGAGGTGGACCCTGATGGGGAAAGGACATTAGGCATCCTGACTAAGCCTGACTTGGTAGACAAAGGCACAGAGGAGACTGTGGTGGACATAGTTCATAATGAGGTTATCCAGCTGACTAAGGGCTACATGATAGTCAAGTGCAGGGGCCAGAAAGAGATCATGGAGCGAGTCTCACTGACCGAGgccacagagagggagaaggcttTCTTCAAAGAGCACGCTCATCTCAGCACACTTTATGATGAGGGGCATGCCACCATCCCTAAACTGGCGGAGAAATTAACTCTTGAACTAGTGCAACATATCGAGAAATCCATGCCTCGTCTAAAAGAGCAGATTGAGGAAAAGCTGGAGGAGACACGCACCGCTCTGGAGAAATGTGGTACCGGACCCCCTGAAGACCCAAAAGAACGGCTGTATTTTCTGATCGATAAAGTGACTTTGTTCACCCAGGATGCCATTAACCTGAGCACTGGGGAGGAGCTGAAAAGTGGAGACATCAATGTTTTCTCCACACTCAGAACAGAGTTCGGGAAATGGAAGGCACACGTGGATCGCTCTGGAAAGAACTTTAATAAGAAGATTGAAAAAGAAGTGGATGATTATGAGAAGCGGTACCGTGGAAGGGAGCTCCCAGGGTTCATCAACTACAAGACCTTTGAGGTGATTGTGAAGGACCAGATCAAACAACTGGAAGAACCAGCAGTCAAGAAGCTGAAAGAGTTATCAGATGCTGCTAGGAAGGCGTTCATACTGCTGGCTCAGAACAGCTTCACAGGTTTCCCTATCCTTCTGAAAACAGCAAAGACTAAGATCGAGACCATCAAGCAGGAGAAGGAGTCTACGGCTGAGTCCACGTTGAGGACTCAGTTCAAGATGGAGCTGATAGTGTACACACAGGACAGCACCTACAGCTCTAGcctgaagaagaggaagagggaggaggaagagttgGAGGAGGGAGAGTTAGTTAAAAATACTTTAGGGAGTCAGAAAGGGTTCTCTGTTGTCTCTGTAAGGAGTACTGTCAATGGCCTTGACACCCATGCTACCCTACGGGAGATGATGCTGCACCTCAAGTCCTATTATCATATTGCCAGTCAGCGTCTGGCTGATCAGATTCCCATGGTGATCCGCTACCTGGTGCTGCAGGAGTTTGCTTCCCAGCTGCAGAGGGAGATGCTTCAGATGCTGCAGGAGAAGGACAACATCGAGCAGCTGCTGAAAGAGGACATCGACATCGGCAGCAAGAGGGCTGCACTGCAGAGCAAGCTCAAACGCCTGATGAAGGCACGCGACTATCTAGTGGAGTTCTAGTATGGACAGCTGCTTGTTAACATTTAGGATGGTCTTGTCTAACTTCAGATAGGTTGGTTAATGGAAGTAGGCATTGAGGTTTGGGGTAGATTCTGTTATCTAAGTTATAATAAAGTTACTATGCTGTCAA

Function

symbol description
mx2 Enables GTP binding activity. Involved in several processes, including defense response to virus; regulation of nucleocytoplasmic transport; and response to interferon-alpha. Part of nuclear pore.

NR:

description
interferon-induced GTP-binding protein Mx2-like isoform X1

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569608.2 True 2150 mRNA 0.48 12 70747837 70759905

Neighbor

gene id symbol gene type direction distance location
mx2 mx2 coding upstream 9611 70727582 ~ 70738226 (+)
LOC110494491 synpr coding upstream 34855 70671651 ~ 70712982 (+)
nampt2 LOC106565851 coding upstream 91778 70638204 ~ 70656059 (+)
c17h3orf14 cssa12h3orf14 coding upstream 318430 70421256 ~ 70429407 (+)
LOC110494487 ptprg coding upstream 332845 70100371 ~ 70415005 (+)
LOC110494493 mx1 coding downstream 17547 70777452 ~ 70783111 (+)
mx mx coding downstream 33710 70793615 ~ 70801618 (+)
LOC110494494 atxn7 coding downstream 50066 70809971 ~ 70847390 (+)
slc2a9l1 LOC106565846 coding downstream 95243 70851928 ~ 70944023 (+)
LOC110494500 NA coding downstream 412108 71172013 ~ 71173244 (+)
G1482737 NA non-coding upstream 120637 70626841 ~ 70627200 (+)
G1482728 NA non-coding upstream 124617 70622888 ~ 70623220 (+)
G1482725 NA non-coding upstream 127958 70619672 ~ 70619879 (+)
G1482106 NA non-coding upstream 197322 70549969 ~ 70550515 (+)
G1482059 NA non-coding upstream 263525 70483932 ~ 70484312 (+)
G1482873 NA non-coding downstream 180526 70940431 ~ 70940734 (+)
G1482959 NA non-coding downstream 315461 71075366 ~ 71075569 (+)
G1482961 NA non-coding downstream 317502 71077407 ~ 71077707 (+)
G1482962 NA non-coding downstream 319384 71079289 ~ 71079520 (+)
G1480254 pad other upstream 1748654 68934326 ~ 68999183 (+)
G1479621 NA other upstream 2622057 68122538 ~ 68125780 (+)
G1478504 NA other upstream 3084188 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 3879957 66867211 ~ 66867881 (+)
G1483346 LOC106565841 other downstream 418608 71178513 ~ 71180429 (+)
G1483638 NA other downstream 622039 71381944 ~ 71382272 (+)
G1484782 NA other downstream 1544818 72304723 ~ 72305412 (+)
G1484897 NA other downstream 1694658 72454563 ~ 72454924 (+)

Expression


Co-expression Network