Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110494542 |
| gene name | LOC106565797 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 74056175 ~ 74066815 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| opioid growth factor receptor-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021569681.2 | False | 5380 | mRNA | 0.42 | 7 | 74056175 | 74066815 |
| XM_036950602.1 | False | 4908 | mRNA | 0.41 | 8 | 74056175 | 74066815 |
| XM_036950604.1 | False | 4860 | mRNA | 0.41 | 8 | 74056175 | 74066815 |
| XM_036950605.1 | True | 5000 | mRNA | 0.41 | 8 | 74056175 | 74066815 |
74,050,000
74,052,000
74,054,000
74,056,000
74,058,000
74,060,000
74,062,000
74,064,000
74,066,000
74,068,000
74,070,000
74,072,000
74,074,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| taf4a | LOC106565801 | coding | upstream | 598543 | 73444750 ~ 73457632 (+) |
| LOC110494537 | LOC106565802 | coding | upstream | 639488 | 73395740 ~ 73416687 (+) |
| LOC110494536 | LOC106565804 | coding | upstream | 671796 | 73366802 ~ 73384379 (+) |
| LOC110494525 | LOC106565811 | coding | upstream | 1006217 | 73044346 ~ 73049958 (+) |
| LOC110494520 | LOC106565815 | coding | upstream | 1191569 | 72862359 ~ 72864606 (+) |
| LOC110494543 | LOC100136421 | coding | downstream | 3246 | 74070061 ~ 74084580 (+) |
| LOC110494547 | LOC106565793 | coding | downstream | 84450 | 74151265 ~ 74184733 (+) |
| LOC118940492 | NA | coding | downstream | 123180 | 74189995 ~ 74192932 (+) |
| LOC110493251 | LOC106565789 | coding | downstream | 246376 | 74313191 ~ 74387161 (+) |
| LOC110493252 | LOC106565788 | coding | downstream | 321613 | 74388428 ~ 74432420 (+) |
| G1486822 | NA | non-coding | upstream | 69027 | 73986355 ~ 73987148 (+) |
| G1486818 | NA | non-coding | upstream | 74233 | 73981654 ~ 73981942 (+) |
| G1486815 | NA | non-coding | upstream | 74557 | 73981303 ~ 73981618 (+) |
| G1486814 | NA | non-coding | upstream | 74907 | 73980363 ~ 73981268 (+) |
| G1486812 | NA | non-coding | upstream | 76276 | 73979685 ~ 73979899 (+) |
| G1486928 | NA | non-coding | downstream | 78637 | 74145452 ~ 74145667 (+) |
| G1486938 | NA | non-coding | downstream | 118722 | 74185537 ~ 74185740 (+) |
| G1487100 | NA | non-coding | downstream | 167145 | 74233960 ~ 74234247 (+) |
| G1487149 | NA | non-coding | downstream | 215252 | 74282067 ~ 74282292 (+) |
| G1486811 | NA | other | upstream | 76740 | 73978890 ~ 73979435 (+) |
| G1485819 | NA | other | upstream | 774156 | 73281260 ~ 73282019 (+) |
| G1485260 | NA | other | upstream | 930819 | 73122826 ~ 73125356 (+) |
| G1484897 | NA | other | upstream | 1601251 | 72454563 ~ 72454924 (+) |
| G1490016 | NA | other | downstream | 2616784 | 76683599 ~ 76684020 (+) |
| G1491886 | NA | other | downstream | 3941475 | 78008290 ~ 78008799 (+) |
| G1491899 | NA | other | downstream | 3951553 | 78018368 ~ 78019816 (+) |
| G1491963 | NA | other | downstream | 4122197 | 78189012 ~ 78190290 (+) |
