grm6b (LOC106565758)


Basic Information

Item Value
gene id grm6b
gene name LOC106565758
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75014868 ~ 75034468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569757.2
gtgcgtgtgcatggaacatttctgggatcttttatttcagctcatgaaacatgggaccaacactttacatgttgcattcatatttttgttcagtatatatgccAGTGATGTCAAGACATTGTGTATTGTAATTTCTGCTGCCATGGTTAGAGCATTTGCAGATCAATTTGTATGATAAACAGTTATTTGACTCATGCAGTGTTAgtttaaaatgtatgtaatgAAAGCTATACAGATGTATTTAACTTAACCAAAGACCAACATGTCCTCATTAAACTGTTCACAGGTATCAAAGGTAGAGGGAGGAGCCTGGTACTTTAACACTGGATACAGGAACCTTTGATGGCCAAAATCATGACATCACAGAGCCACAAATCGCAGTCCTGCTGTGGGTTTGGTCCACCTTTTGGATGTCATGTAACAACATTTCCCAGGTTACTGTTAATGCTGTTTCTGGGTCTAAGTCCAGAGACATGGGCTCAGCAGGGCACACAACCACACTCCATCAAGATTGAGGGGGACATCACCCTGGGTGGCCTGTTCCCAGTGCACTCCCGTGGGCCAGCCGGTGTGCCCTGTGGGGAGATCAAGCGGGAGAAAGGTATCCACCGTATGGAGGCCATGCTGTATGCCCTGGATCAGATCAACAGTGACCCTGACCTCCTGCCTAACATCACACTGGGGGCCAGAATCCTGGACACCTGTTCTAGAGACACCTACGCCCTGGAGCAGTCGCTAACCTTCGTCCAGGCCCTCATCCAGAAGGATAATTCGGACGTGCGTTGCTCTAATGGCGAGCCACCCATCATTCCCAAACCGGAGAGGGTGGTCGGAGTAATCGGGGCATCCGGCAGCTCAGTGTCCATCATGGTGGCCAACGTGCTGAGACTCTTTGCGATCCCCCAGATTAGTTATGCGTCCACGGCTCCAGAGCTGAGTGACAAAAGCCGTTATGAGTTCTTTTCCCGTGTGGTCCCTCCTGACTCCTACCAGGCCCAGGCCATGGTGGACATCGTCAAGGCTATGGGGTGGAACTACGTATCTACACTGGCCTCAGAAGGAAATTACGGAGAGAGTGGTGTCGATGCCTTCCTCCAGATATCTCGAGAGGCAGGAGGTCTATGCATCGCCCAATCCATTAAAATCCCCCGAGAGCCCAAACCAGGGGGCTTTGATAAGATCATTAAGAGATTAATGGAGACCTCTAATGCTCGTGGGGTCATCATCTTTGCCAATGAGGACGACATCAGACGTGTCTTAGAGGCAGCAAAGAGGGCCAACCTGACGGGTCACTTCCTTTTTGTGGGCTCTGACAGCTGGGGGGCCAAGAGCTCGCCCATCCTGGACCAGGAGGATGTGGCTGAGGGGGCTGTCACCATCCTCCCTAAGCGGGCCTCCATCGACGGGTTTGACAACTACTTCACCTCAAGatctctggaaaacaacagaaggAACATCTGGTTTGCTGAATACTGGGAGGACGACTTCAAATGTAAACTGACCCGAGCAGGTATCAAGTACGACCTTGGTAGGAGAAAATGTACAGGTGAAGAGAGAATCGCTCAGGAATCTCAGTATGAGCAGGAAGGGAAGGTACAGTTTGTGATTGACGCGGTGTATGTCATGGCCCATGCCTTACACAGCATGCACCTGGACCTCTGTCCGGGCTCCATGGGTGTCTGTGAGAAGATGGACCCAGTGGAAGGGAGTAAGCTGCTCCAATACATTCGCTCAGTCAACTTTAATGGCAGTGCAGGGACTGGGGTCATGTTCAATGAGAATGGAGATGCTCCTGGTCGCTATGACATCTTCCAGTTCCAGCTCTCAAACACCACCAACCCTGGCTACCGGTGTATTGGCCAGTGGACAAACTATCTGCGACTCAATGCTGAGGAGATGCAGTGGTCGGGTGGGGACAGTGCAGTCCCTGACTCGGTGTGCAGTTTCCCCTGTGAgttaggagagaggaagaagatggTGAAGGGTGTGCCCTGCTGTTGGCACTGCGAGCTGTGTGACGGATATCAGTACCAGCTGGATGAGCTAAACTGTGACATGTGTCCCTTCGACATGCGTCCCATGCCAAACCGGACGGGCTGCCGATCCACACCCATTATCAAGCTGGAGTGGAGCTCCCCCTGGGCCATCATCCCTGTGTTCCTGGCTGTCTTGGGCATCTTAGCCACCTCTGGATGCATCATCACCTTCATCCGCTTTAACAACTCCCCCATCGTCCGGGCCTCCGGCCGGGAGCTCAGCTATGTTCTCCTGACAGGCATCTTCCTCATCTACCtcatcaccttcctcatgatcgcAGAGCCCAGCGCCCCAGTATGTGCATTCCGCAGGCTGCTGCTGGGCCTGGGCATGTGTATTACCTACTCAGCTATGCTCACCAAGACCAACCGCATTTACCGTATTTTTGAGCAGGGCAAGAAAGCAGTCACGCCACCTCCGTTCATCAGCCCTGCTTCTCAGCTCATCATCACCTTTATACTCATTGGAGTGCAGTTACTTGGAGTTTTCATCTGGTTCGGAGTGGTGCCCCCACACACCATCATAGACTATGAGGAGCAGCACCCGCCCAACCCAGAGTTTGCACGTGGGGTCCTGAAATGTGACATGTCCGACCTGGCCCTGGTCCTCTGCTTAAGCTACAGTATCGTGCTGATGGTGACCTGCACTGTGTACGCCATCAAAAGCAGAGGGGTGCCAGAGACCTTCAACGAGGCGAAACCCATTGGCTTCACCATGTACACCACCTGCATCGTGTGGCTGGCCTTTGTGCCCATCTTCTTTGGCACAGCCCAGTCTACTGAAAAGATGTTCATCCAGACCACCACCCTGACGGTGTCCATGAGCCTGAGTGCCACTGTGTCGCTCGGCATGTTGTACATCCCTAAGGTCTATGTCATCATCTTCCTTCCGGAGCAGAACGTGCAGAAACGCAAACGCAGCTTCAAGGCTGTGGCTTCAGCAGTGACCACACAACTCTCCCAGAAAGAAGACAAGCAGAACGGAGAGTCCAAAAGTAGCGCCATAGTCCCTGACAGATCACAATAACCCAGCAGGAAACCAGAGATGAATGCGACACATGGCGCCTTACAGATGACagcttagcatggtctctcttGGCAAAGCACAGCTTTTGATCAATGGTGAAGGCTACACTGTCACATGGTTGGGATGGAAATGAAAAGGAGACGCTAACTTTGTCATTCTAAATAAACACTGACTGACTCGCAACAAGTGCTGTGACCTGACTGTAAACGGAACAGTTGATACATTGGATCATCCTCCTGGATCATCCTGATTCCTGAACAGAACACAATGAACATTGTAGACAGCTTTGCCAGACTTCAGGACACAGTGTCTCCTTTTACAGTAGGATATCTCAAATTGACCATGGCAATGAAATAGTCTTCTTTGATTTTTCTCCTCAGGACAATTATTTGGGTCAGTAGTTGATCAAATGATAAACCTTTTCCCGACTGGATGATCCAAAGTGGGATATTTTGAAAACAATGAAGCTTTGTTTGCTTGATTTATCAGCACTACATGGGTTGTGTGTACATTATATGAATGCTTCCATAGTATTGTGTGTATGAGTGTTACGACTTTGACTCGTTCTTTTTTACTGATTTCACCGGAAGGAACTAGCTTTTCTATACACTACTAAATCCTGGAATACGTGTAGGGTTCATGGAGGACATACTTTTAAAGAGAGAAACAATTGTAGGGAATTTTGATTACTGACGTCAATACTACCAGATCAAACCTCATGTAAGGGACCAttttaatataacatctacagtaAATGCTTTTGTTCGGTGTTAATTGTTTTAGTGGTAATGACTTGTATATGCTGCTGCAGTCTCTCTATACAAGAAACCATTGATTCTGAACAGGATATTGTGTTTTGTAAGGCACCTGTCACAATTGCGTTGTTAGAACAACTTATGGTAGACACTACACAATGTATGGCAGTTCCCTAGATTGTTCCAAATATCTTTACAGTGCTGCTGGGGTTGTGATAGGGAGAACAGTTATGGTAACACTAGATTTCACTGGGAATATCATTTGTATTTCCAATGCCTACTTTTGTTCGTCAATATTGTGCCATAAAATCACAGGTTTGTGGTATCAAAATGTTACAAGTTTCCCTTAATTTAAATTAGTGATTTTATGTAAACCTATTTGTAAATGAATATTGTGGCACCATAATGGTCCACAAAACCACGATAGCCCAGTTAAGGTCACATTTCTAGATCACAGAACGCATGCAGCATTCACTCTGTGCTGAGTTTGAGTTTCTATTTTGTGAGTTCGAACGCCATGCAGTGGTGGCTCAGTTTGCAACAATGTTATTTGCAGTAAGATAATGTTTTACTTTGCCGGGGTTATGCTCAGGCTAAGGGAAAAA

Function

NR:

description
metabotropic glutamate receptor 6-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050908 detection of light stimulus involved in visual perception biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569757.2 True 4423 mRNA 0.48 11 75014868 75034468

Neighbor

gene id symbol gene type direction distance location
LOC110494575 LOC106565759 coding upstream 555 75000076 ~ 75014313 (+)
comtb NA coding upstream 3164 75009395 ~ 75011704 (+)
ccdc120 LOC106565760 coding upstream 17250 74968357 ~ 74997618 (+)
mbd1b LOC106565762 coding upstream 46669 74950698 ~ 74968199 (+)
cxxc1b LOC106565764 coding upstream 71263 74937768 ~ 74943605 (+)
mon1a LOC106565757 coding downstream 9437 75043905 ~ 75050060 (+)
mst1rb LOC106565756 coding downstream 18410 75052878 ~ 75071428 (+)
LOC110494580 LOC106565755 coding downstream 144538 75179006 ~ 75259755 (+)
arl6ip5a LOC106565746 coding downstream 857139 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 971715 76006183 ~ 76046166 (+)
G1487838 LOC106582872 non-coding upstream 2692 75007466 ~ 75012176 (+)
G1487813 NA non-coding upstream 69751 74944899 ~ 74945117 (+)
G1487809 NA non-coding upstream 84971 74929682 ~ 74929897 (+)
G1487790 NA non-coding upstream 115184 74899433 ~ 74899684 (+)
G1487778 NA non-coding upstream 139479 74875182 ~ 74875389 (+)
G1487973 NA non-coding downstream 4529 75038997 ~ 75039259 (+)
G1487979 NA non-coding downstream 8469 75042937 ~ 75043140 (+)
G1488009 NA non-coding downstream 39302 75073770 ~ 75074016 (+)
G1488022 NA non-coding downstream 50403 75084871 ~ 75085268 (+)
G1488023 NA non-coding downstream 50996 75085464 ~ 75085762 (+)
LOC110493252 LOC106565788 other upstream 605679 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1035433 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1732849 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1889512 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1969280 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1649131 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2973822 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2983900 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3154544 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3218161 78252629 ~ 78253308 (+)

Expression


Co-expression Network