mon1a (LOC106565757)


Basic Information

Item Value
gene id mon1a
gene name LOC106565757
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75043905 ~ 75050060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569765.2
CCCCATAATTCAATAATAAAGGCACTGTACTTCCGTCAGGAGATACGCGCCCGCTAGAGgtggtattattctacacacaaaGAGTCAAACAACAGTTTACGATAACGTTACAACAGTTAACATGCATTTAAATTCTTCTCGGAGAAATTAAAGGTGGTTGTCCCTGTAGTAACTTATGCAGCAGTGATGGCTGTATATGTCCACAACAAGGGTATACCGTGGGAGGTCCAGCAGAATGGCACCCTGGCACCAGTGGACCGTCTCCGCAACGAGAGGTCTGAAAGCCCCACTCCAGGCCTGGTGGTGGGCACAGAACCAGGTGCTGGCCAGGAGAGTGCCATGTTTGTTCATGCACAGTCCTTTGAGGACCTGACTGCTGACAGTGAGCCGACTACTGAGCCAGAACCTGAAGGAGAGACTGTGCTTGAAGAGTCAGCAGAGGAGGAGGCTCTATGTCTGGGGGCTGAGCAGGTGACCCAGGAGGAACAGCAGCCGGAGGTAGAGGAGGAGCGCCCAGAGAACAGGAGTAAGGAAGAGGATGTGTGCAGTGAGGTCTGGCGTAGCCACAGGAAGCATGTGTTTGTACTGAGCGAGGCAGGCAAGCCCATCTACACCCGCTACGGCACAGAGGAAGCCCTCTCCAGCACCATGGGGGTCATGATGGCACTGGTCTCTGTCGTGGAGGCAGATAAGAATATCATCCGCTCCATTCACGCAGATGGTTACAAAGTGGTGTTCCTTCGCAAAACTCCTCTGGTCCTGGTGGGTGTATCCCGGACCTGTCAGTCAGACAGAGAGCTGACGCGTGAGTTGCAATACATCTACTACCAGATTGTCAGCCTGCTCACCCTCACCCAGCTCAACCACATCTTCCAGCATAAGCAGAACTACGACCTGCGCCGCCTACTGGCAGGCTCCGAGCACCTCACTGACAACCTGCTGCGTCTGCTGGACCGCGACCCGGGCCTGCTCCTCAGTGCTGTCACCTGCCTCCCCCTGGCCAGCTCCACCCGCGACCTGGTCTCATCCAGCCTTCAGGCCGCCAAGGCCAAGAGCTTGGTCTTCTCCATCCTCTTGGCTGGGGACCGTCTGGTCACCCTGGTGCGCAAGAAGGACCAGTACCTGCACCACATGGACCTGCACCTGCTCTTCAACCTGGTGGGCTCCTCGTCATCTTTCCGCGAGGGCGAAGGCTGGACGCCCATCTGCCTCCCTAAATTCAACACTGCTGGCTTCTTCCATGCCCACATCTCCTACCTGGAGCCTGCCTCTGACCTCTGCCTCATCCTGGTGTCCACCGACCGGGAagacttctttaacctgtctgatTGCAAGCGCCGCTTCCTGGAGCGGCTGAGCCGACGCACTGCCTACCAGTCCCTGAAGGAGGCACTGAAGTGCCCCAGCTACTCTGTCACCCAAGTCAGCATCCCAGAACTCAGGCACTTTCTGTACAAGTCTAAGAGCTCAGGGCTCTACACTAGCCCTGAGCTGCCCTTGCCATACCAATCTTTAGAGGACCAGGAGAGGCTGATGGGATTGTACCAGTACCTCCACAGCCGCTTGCACCAACCGACACGTCCCCTGCGCTCCATCTACCGCTGTGGAGAGACTGAGAACTTGCTGGCCTGGGTGACCAGTGGCTTTGAGCTCTACCTCTGTTTCAGTCCTCTTGGGACCAAGGCCATGGCCGTGGCTGCTGTTAATAAGCTGCTGAAGTGGATCAGGAGGGAGGAGGACCGCCTCTTCATCCTTAGTCCCCTGACATACTGAGCCCCCATCTGAACTAGCTACAGTTCCAAGAAGCCCTGGCCCTCTAAACTCGCCTCATGATGTTGAAGTCTGATGGTCACCATTGGAGGCCATGGATATAATGCCAACAAACCATCATGCATCACTGTTGTGCATATGTAGTCTGTGTTTGCCCTTTGCAGACCCTTCAGTCTATGGTCATCAGGGGGTCCAATGAGGTCATCACAATGAGAGTACAGCTATGTTTTATCaaacataatttttttattttaattgtttGCTTCAACTACGGTGATTGCCCTATGGGAATTGAGAGTTACGCAGCAGACATTTCAATGAATAACAATAACATCTGTGATGCTGTCCCTGTTGCTATAAGATGATTATTTTAAACTCACTGTATGGAATCACTACCTGGACATGAGGAATGCTGTGTGTTGTTTTAGCAGTAACCTACAAATATAACCAATAGAGACTGACCATCTTGAAAAGGAACTACATTTGTTTTTATGTAACTCTAGTATGTGCCTGAGGGGCTGTTTTATGTTTACCAAGATGCTCTTGCTTGGTTAGGGGATGCATGTGAAGGGCAATGGTTAACTTTCTGGGGAAAGCACATTCCTGTGACTCAATAGAGTCAATATTGTCAATAGTCCCTTATAGTTAGCCCAATAATTGATGAAACCAAAAAAATATTAATCTCACTTAATGACTGTAATGCAGTTAGCCCCATGCGCTCTACTTAGGCACATATGCACATACTTAAAAATATTCATTTCATTATTTTGTTTGTCTGCATACTGCAAGAGTAATGTGAAAATTCTACCATGATTACTGTTTTGTTTTTTCAAAAGATTGTTTTGAaattttttttaatgatta
>XM_021569766.2
CTTCAGTGTGTGTTGGCTGGATAAGAGGGAGAAGGAATGTCGCTGCACAAGAGCTCACATGTATCATTTCTCATCCACATATCATGCTTCCTGGATTTAGAATAAGTGGTCTTTGAAATAAGTGGTGCTGGCCAGGAGAGTGCCATGTTTGTTCATGCACAGTCCTTTGAGGACCTGACTGCTGACAGTGAGCCGACTACTGAGCCAGAACCTGAAGGAGAGACTGTGCTTGAAGAGTCAGCAGAGGAGGAGGCTCTATGTCTGGGGGCTGAGCAGGTGACCCAGGAGGAACAGCAGCCGGAGGTAGAGGAGGAGCGCCCAGAGAACAGGAGTAAGGAAGAGGATGTGTGCAGTGAGGTCTGGCGTAGCCACAGGAAGCATGTGTTTGTACTGAGCGAGGCAGGCAAGCCCATCTACACCCGCTACGGCACAGAGGAAGCCCTCTCCAGCACCATGGGGGTCATGATGGCACTGGTCTCTGTCGTGGAGGCAGATAAGAATATCATCCGCTCCATTCACGCAGATGGTTACAAAGTGGTGTTCCTTCGCAAAACTCCTCTGGTCCTGGTGGGTGTATCCCGGACCTGTCAGTCAGACAGAGAGCTGACGCGTGAGTTGCAATACATCTACTACCAGATTGTCAGCCTGCTCACCCTCACCCAGCTCAACCACATCTTCCAGCATAAGCAGAACTACGACCTGCGCCGCCTACTGGCAGGCTCCGAGCACCTCACTGACAACCTGCTGCGTCTGCTGGACCGCGACCCGGGCCTGCTCCTCAGTGCTGTCACCTGCCTCCCCCTGGCCAGCTCCACCCGCGACCTGGTCTCATCCAGCCTTCAGGCCGCCAAGGCCAAGAGCTTGGTCTTCTCCATCCTCTTGGCTGGGGACCGTCTGGTCACCCTGGTGCGCAAGAAGGACCAGTACCTGCACCACATGGACCTGCACCTGCTCTTCAACCTGGTGGGCTCCTCGTCATCTTTCCGCGAGGGCGAAGGCTGGACGCCCATCTGCCTCCCTAAATTCAACACTGCTGGCTTCTTCCATGCCCACATCTCCTACCTGGAGCCTGCCTCTGACCTCTGCCTCATCCTGGTGTCCACCGACCGGGAagacttctttaacctgtctgatTGCAAGCGCCGCTTCCTGGAGCGGCTGAGCCGACGCACTGCCTACCAGTCCCTGAAGGAGGCACTGAAGTGCCCCAGCTACTCTGTCACCCAAGTCAGCATCCCAGAACTCAGGCACTTTCTGTACAAGTCTAAGAGCTCAGGGCTCTACACTAGCCCTGAGCTGCCCTTGCCATACCAATCTTTAGAGGACCAGGAGAGGCTGATGGGATTGTACCAGTACCTCCACAGCCGCTTGCACCAACCGACACGTCCCCTGCGCTCCATCTACCGCTGTGGAGAGACTGAGAACTTGCTGGCCTGGGTGACCAGTGGCTTTGAGCTCTACCTCTGTTTCAGTCCTCTTGGGACCAAGGCCATGGCCGTGGCTGCTGTTAATAAGCTGCTGAAGTGGATCAGGAGGGAGGAGGACCGCCTCTTCATCCTTAGTCCCCTGACATACTGAGCCCCCATCTGAACTAGCTACAGTTCCAAGAAGCCCTGGCCCTCTAAACTCGCCTCATGATGTTGAAGTCTGATGGTCACCATTGGAGGCCATGGATATAATGCCAACAAACCATCATGCATCACTGTTGTGCATATGTAGTCTGTGTTTGCCCTTTGCAGACCCTTCAGTCTATGGTCATCAGGGGGTCCAATGAGGTCATCACAATGAGAGTACAGCTATGTTTTATCaaacataatttttttattttaattgtttGCTTCAACTACGGTGATTGCCCTATGGGAATTGAGAGTTACGCAGCAGACATTTCAATGAATAACAATAACATCTGTGATGCTGTCCCTGTTGCTATAAGATGATTATTTTAAACTCACTGTATGGAATCACTACCTGGACATGAGGAATGCTGTGTGTTGTTTTAGCAGTAACCTACAAATATAACCAATAGAGACTGACCATCTTGAAAAGGAACTACATTTGTTTTTATGTAACTCTAGTATGTGCCTGAGGGGCTGTTTTATGTTTACCAAGATGCTCTTGCTTGGTTAGGGGATGCATGTGAAGGGCAATGGTTAACTTTCTGGGGAAAGCACATTCCTGTGACTCAATAGAGTCAATATTGTCAATAGTCCCTTATAGTTAGCCCAATAATTGATGAAACCAAAAAAATATTAATCTCACTTAATGACTGTAATGCAGTTAGCCCCATGCGCTCTACTTAGGCACATATGCACATACTTAAAAATATTCATTTCATTATTTTGTTTGTCTGCATACTGCAAGAGTAATGTGAAAATTCTACCATGATTACTGTTTTGTTTTTTCAAAAGATTGTTTTGAaattttttttaatgatta

Function

NR:

description
protein SAND-like isoform X1

GO: NA

KEGG:

id description
K20195 MON1; vacuolar fusion protein MON1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569765.2 False 2634 mRNA 0.50 6 75043905 75050060
XM_021569766.2 True 2439 mRNA 0.50 5 75045045 75050060

Neighbor

gene id symbol gene type direction distance location
grm6b LOC106565758 coding upstream 9437 75014868 ~ 75034468 (+)
LOC110494575 LOC106565759 coding upstream 29592 75000076 ~ 75014313 (+)
comtb NA coding upstream 32201 75009395 ~ 75011704 (+)
ccdc120 LOC106565760 coding upstream 46287 74968357 ~ 74997618 (+)
mbd1b LOC106565762 coding upstream 75706 74950698 ~ 74968199 (+)
mst1rb LOC106565756 coding downstream 2818 75052878 ~ 75071428 (+)
LOC110494580 LOC106565755 coding downstream 128946 75179006 ~ 75259755 (+)
arl6ip5a LOC106565746 coding downstream 841547 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 956123 76006183 ~ 76046166 (+)
zgc:113054 LOC106565741 coding downstream 1023003 76073063 ~ 76088669 (+)
G1487979 NA non-coding upstream 765 75042937 ~ 75043140 (+)
G1487973 NA non-coding upstream 4646 75038997 ~ 75039259 (+)
G1487838 LOC106582872 non-coding upstream 31729 75007466 ~ 75012176 (+)
G1487813 NA non-coding upstream 98788 74944899 ~ 74945117 (+)
G1487809 NA non-coding upstream 114008 74929682 ~ 74929897 (+)
G1488009 NA non-coding downstream 23710 75073770 ~ 75074016 (+)
G1488022 NA non-coding downstream 34811 75084871 ~ 75085268 (+)
G1488023 NA non-coding downstream 35404 75085464 ~ 75085762 (+)
G1488028 NA non-coding downstream 42829 75092889 ~ 75093293 (+)
G1488273 LOC106565754 non-coding downstream 228558 75278618 ~ 75284031 (+)
LOC110493252 LOC106565788 other upstream 634716 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1064470 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1761886 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1918549 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1998317 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1633539 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2958230 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2968308 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3138952 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3202569 78252629 ~ 78253308 (+)

Expression


Co-expression Network