mdfic2 (LOC106565739)


Basic Information

Item Value
gene id mdfic2
gene name LOC106565739
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76093616 ~ 76108409 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948355.1
TCATGCCAAATGGAACTTGCGCGAGAGATTGCAGGAGTGCATGATGTGTGTATGATGATCCCGGCGAATTCGGTCCACAAGGAGCCTGACCATCTGCTGACAGTTTCCACAGCAATGGATCTGATGGCAGATCAGAAAACCAGAACAGAGGATGAACGTGGAAAAGAAATGGAAAGGAAAGGTGGAAATAAATGCTCTTTGGTAAGAGATGGGGAGGTTCTTAGCGAGGCCCCAGTCAGTGTCCGGAAGCTGAGCGTCATTCCAGAGAACGAGCCAGATCCAGGGAAAGCTGACACAGACCAGGCCTCCCATGATCCTCAGCTGCCCAGGGAGAAGGACAGCTCCACTTCTCTTTTCACTGTGAACAAGTACAGCAGGAACTCCTCCTCATCagactctctctccacctcctctcatcAGACTGACACAGGAGcTGACTGTGCAGGGATTGTCCTCAACTGCCTCTTCTGTAGGTTCTACGATCTGTTCCTTATGTTGCCAAACTCCTGTGATGAAGTCACTTATTGCTGCTGCCCTTCCTACAGACAGTACTCCTCCTCAGTGGAGGCCATACCTAGCAATGACTGCAACTGTAACTTTGACTTTGACTGTGGCCTGTTTGACACCTGTCAAGAGACAGGTGAGTTTCTGGAGCTGGCTATGGAGCTTTCTGAGATCTGTTATCGCTAGCTATCCTTAACGTTATGGGCTGAAGAACAAGGAGGCTAAGCTAGGGCGAACCTGAAGTCATGGCACAGCATATGTTCAACAAATAGGCCTAAGAATATGCTGCTAACATGGGGACCTGGACTGATGTTGAACTGGGAATGTACAAGGCTTTAACAGTCAGCCACACCTTGCAGTTAAGAGAGAATGGCTGCTCTTCAACCTCTATGAACAAAATAAATAATCCTTTTCATCATGGACTTGCATTCACTGAAGGATGGTAGAGGGGTCAAACCATGACCTTTAGACGGGTCAAACCATGACCTTTACTAGTTACCTTGTATCAGCACGACATTGACCTAGCTTGTTGCATGTGTAGTATTGTATGTGTTAGCATATCTAAGCCTATGTGTGCTGAGGTCCTAACTGCAGAGAACAGTGAGGTACACAGTGGACAATGCCTGCTCTGAGGGTTGTGGATTCCACCCCTGAAGTGTTGTACACCAACAGACACCTCAGCTTCTGCATGTCAGTTcccttttctttttttctgaAATGCAAAAAAAATCTTAAAGCCTTTCGTGTTCACAGGTCTATTTCAATATAGTGTCATTGTTACCACAGAAACAGTTGGAGATGGCATGTCTAGGACATGTCTAGGACACTCGTCCCATCGAACTCTGTTCGTGAAGATGGTCCTCTCAAGTGGCGGCTGACTGTGTGGATCACTTCAATCTGAAATGGGTCCTTGTCATATAATAGTACATGGACACTGGAGTATTGGTGGGTATCTCACTCTCTCCAGGTAAAGTACACAGCAAGAGCAGCATGAAGTAATGCATCATCTGTTTCTCTGGGAGGTCAAGCAGACAGGGCCCGTCTACTCTTCATCACCATGGACACCGAGGGTTATTATTTTCTCTGGGAGGTCAGGCAGATAGGTCCCGTCTACTCTTCAGCACCATGCACACCGAGGGTTATTATGTTTCTCTACTCGCTAAACATTTATTTTCTGTTATCAGATGTGAGGACCAACAGTGTAATCCTGCTGTACAAACAAGAAGAAAGTCACAGCCCAGTTGTCTGAGACACTGAGCTCATGTAATACTGTTGTATTGTTTGCTGAGAGTTACGAAATCATACCGGTTTATATGAAAATGCATATGGAGAGTATTTGTGAAAAAACACGAAAGCTTTTGATTGTGAACCTTAGGCTAAACTATTGTATGAAAACTGGATCTTGACGTTTTAAAAGAACTTAACCACAGTATGCTAAAATTAAATTGGTGACACTCCTGCCTAGACCGCAGTACAGTAGAACAAATAGTAGCACTGTATGCAGACACCTAATGACCATGTATAGTAAGCATTTTGTGCAGAATGAGAACGCTGCTTGTGACCAATTTGCTTATTAACTGCAGCGGCACAATTACAAAGCTGACTACTCCAGCTAATACTGCACCATAAAATCTATTGAAGGTCCTTTGTGGGTTTTTTAAACATAAAGTGTGTCTGCATAAACAGATGCTTGGCTTAAACTGAAAACATCTGCCCGTCTTAAACTCGCTGGAACTCTTTCAAATTACCTGATAGCTTGGGGAGCAGCATGGGTTTTAGGATCTCTAATGCATTTTAATCACATCCAAATGGCCTGTCTTTTAGAGCCCCGGTTCACAGGATGTCCCAGCTAGATGTCCCAGCTCAGTCCAGGAGGAGGTCAAGTGGCTGTCATTGCTTTGTACTGTACCACATGCATGCGGTTAAATGGCTGCTCACAGAATAGTGTTAACCCATTATATTGCACGTCTCACCACTGTTCACAGCTGAACTCACATCACGTGTGCAAAGAGTCTAATCTTTTAACATCGGCTTTGTTATTGTGGTTGTATAATGATGTGCTGGGATAATTTTCCATTATTGTGTTTAGTGATGCTAGACTTGCATTAAATAAAGTGTATcttgttatctgctgtgttagcTGGCATGTTGACATGCATCTCTGCTCTCTAATCGGATGTGAGTTTTTCTTTGGAGTTTGAGGCCCCAATCGCTTTATTCTTGTGATGCAGGCTCTTCCTCCAGAGTACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTACTCTGAGACCCTCTCACACAGCCCTAATACGACCTCCCCCCAGAACCTCTCACACAGCCCTAATACAACCTACTCTGAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTACTCTGAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATACAACCTCCCCTCAGACACTCTCACACAGCCCTAATACAACCTCCCCTCAGACCCTCTCACACAGCCCTAATGCAACTCAGAGTGGCCTCCTGAGGAACAGCAACATTAAATATTAACATAATGTGTTTAGtcgttttttttatttcaaaCTGCAGGTTTGTCAGCATCTTGTGTACTCTTTCTCAAGATTCAGTCCGTGTGGAGATGTCTTCCCTGGAGATGTGTTCCTTTCAAAGGCTTTATGTAGCCCTGTGCCGTTGGAATAATTTAGGTATGTTTTTCTTATGTTCTTTCTGTGTTAATATTGACAACATTTTCactgtgatttaaaaaaacaaatggagCATTATAAGTGCATTTAGGTATTGCTTACTGTACCTTGAAGTGCAAAATGTATCCGTCGGAGAAGTGAAGATTGTTTGGGTGTGTTGGTTGGGTATACGTCATTGCTGACACAAATGTTGATGCATGTGTTTCTCATTAGGCCCTGTATTTCGTCTGTCAAAATCTTTCCTTTTTATCTCAAATTACACCCATATTGAAGAATGCACAATCCTTATTTTCGATAACTGCTGTGCTTCAGAGAAAGGTAATTGTAGATGATTACAGGAACATGTAAAAGCATTTTGTGGATTGTACTTTTGCTATTGTCTCAGTTTAGTTTACATGTCTGATGTCACTATTACTCCTTTAAATGAACTTGACCTTACTCTTTGAGGAATGGCATGTGTGTGCTATGTGCATCCTACCCAATTAGGCCAGAGGCACTGGAGCAGTAGAAACTAACACTCCCACAGCATCCTCCAGGAATTGAGCCTGACACTACTGCCTTTCTTGAATCTATATTTGGGCCATGTGTGTGGATCTGTGTCACTCAAGAGCACAGGCCCAATCTACAGTAGAGAAAGTAGAGTGAGCTCTGGGCCTGTGGGCTGCGTGTGCCAAGGCACAAAAGGAGCTCCCTCCCAGCAGGCACAGCCGTACCAACCAGGCCCTGGGCAGACTTTTATGATACCTTTCAATCAGCAGCTGATTCCCATCTGAAATGACAGGTGATTTGACTCAGCCTCCAATTAATGGCCTCATTTGAACAATtaagagcaggaggaggaagggaaaaTCTCATGTACTGACTACTGAATGAAGGCTGGAGGCGTAGTGATGATAGCCTGATAGTAGAAAAACACTGCTATCTCATCATCATCACAGTCCCCCTCACTGAACGTAACTGATGCCCATGGTATCTTCCCAGGTTGGGGGGCCCTAACACTCTACCAGGTGTTGTCCCGTACTCTAGTTGGGTCCCAGACCTCTGTAAGGGGTGGGTAAGGGAAATGGAGGATGGGTAGGGAGGGAAGTTGAATTTAGTTTGGGGTCGGCAAACATGGCAGGGGATGATGGATGACATCAAACTCGCCTTGGcccccatcccctcccctcctgtcTTCACAGCGTAGAGGAAATTAAAGAGCTGTGTAGCAGAagaaggaggggggagtagggggTGATTTAGAGTGTGGCGCAGGGGGATGGGGACCTGGCGCATTGGAGTTAATTACTGAATAATGAGGAACAATTTATTGTGTTCTTGTTAGAGACATCAAAACGCTGGATGCTGCCTACAGAAAAAGAGCCTCTCGCTTTATACGTCCCACTAAATGCAGTATTTAACTTGGAGTCATTAAAGAGGCACTGCCTTGCCTCGTTCCAGTCAGCAGTGGAGAGCAGCTTCCCAGGGCTTATGAAGGAACAGCTAACACTGTCCTAACGCCAGGTACCTCCTAAGTGCCTCTCCTCTGGAGAATGTGTTCAAAGAAATAATGAGAATTGCATTAGCTGCAGATCGATCTCTCCCGTATCTTCCATTCTTCTGCTGATGAGCATGGCATAACTACTCCTATTCACCTTTCAACCCCTGCAAATATACACAGACCTACTGTAAAAGGGCTTGTGATTCCCCTCAGGGAATGCGCTTGTTGTCATGTTCATGACTGTTACGGAATCCAGATGCCTTTGGTTTTAAGTTTAAATGTCATGGAGCAGTTTTAGACATACTGTCATCCAGTTCGGAAAGAACAAATGTATCATAAAAAACATCTGAGTATAGCTGCTACTGTACATTGAAATCACGTCTTCCACCATATCTTGAGTACAGTATATCATACTCATTAGAAGACAAGCTAGCTGTTAAATGGTTATCCAATTTGCACAGAGCATAATACATGCACCTTGATGATGTATTCTATAGAGCAGTGGTTCCTAACTCCGGTTCTCCAGTACCCACAAGAGTACACATTTTGGTTGAAGCCCCAGACAAACACACTAAATTCAACTTGTCACGGggttgatgattagttgacaagtagaATCAGCTGTGCTTGTCCGTGGTGTCAGATGTGGTGTTAGATGTGGTGTGTGAAGCAGACACACTCTTTGATGTGTTAAATATGAGATCTGACCACAGAACAAAGCAGCTGTCAGACACAGACTGTTGTCAGAGGCAATCCACGCCAATTATTATTGAGTATCTGTCATGCATGAT

Function

NR:

description
PREDICTED: myoD family inhibitor domain-containing protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948355.1 True 6028 mRNA 0.45 4 76093616 76108409

Neighbor

gene id symbol gene type direction distance location
LOC110494594 LOC106565742 coding downstream 19390 76065107 ~ 76074226 (-)
frmd4ba LOC106565744 coding downstream 104751 75909622 ~ 75988865 (-)
trnt1 trnt1 coding downstream 202383 75886130 ~ 75891233 (-)
LOC110495193 LOC106565942 coding downstream 207778 75884184 ~ 75885838 (-)
lrrn1 LOC106565747 coding downstream 356840 75723880 ~ 75736776 (-)
LOC110494596 LOC106565737 coding upstream 75967 76184376 ~ 76417448 (-)
LOC110494597 LOC106565735 coding upstream 316933 76425342 ~ 76429173 (-)
LOC110493258 NA coding upstream 356511 76464920 ~ 76467603 (-)
LOC110494599 LOC106565733 coding upstream 436821 76545230 ~ 76572027 (-)
LOC110494603 LOC106582849 coding upstream 591052 76698772 ~ 76835863 (-)
G1489327 NA non-coding downstream 5957 76086757 ~ 76087659 (-)
G1489277 NA non-coding downstream 24196 76022442 ~ 76069420 (-)
G1489272 LOC106565743 non-coding downstream 50832 76018639 ~ 76042784 (-)
G1489216 NA non-coding downstream 184903 75908514 ~ 75908713 (-)
G1489208 NA non-coding downstream 190102 75903200 ~ 75903514 (-)
G1489826 NA non-coding upstream 369557 76477966 ~ 76478272 (-)
G1489930 NA non-coding upstream 419205 76527614 ~ 76527916 (-)
G1489935 NA non-coding upstream 425993 76534402 ~ 76535041 (-)
G1489962 NA non-coding upstream 477829 76586238 ~ 76586531 (-)
G1488708 NA other downstream 568020 75525182 ~ 75525596 (-)
G1488266 NA other downstream 829393 75263720 ~ 75264223 (-)
G1487872 NA other downstream 1193869 74899391 ~ 74899747 (-)
G1487599 NA other downstream 1386007 74707345 ~ 74707609 (-)
G1487454 LOC106565788 other downstream 1669731 74422647 ~ 74423885 (-)
G1490147 NA other upstream 588387 76696796 ~ 76698096 (-)
G1491128 NA other upstream 1373532 77481941 ~ 77482389 (-)
LOC110493260 NA other upstream 1979194 78086079 ~ 78088852 (-)
LOC110494620 LOC106565713 other upstream 2106590 78214999 ~ 78389849 (-)
G1492729 NA other upstream 2364609 78473018 ~ 78475506 (-)

Expression


Co-expression Network