LOC110494613


Basic Information

Item Value
gene id LOC110494613
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78028591 ~ 78029532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037083.1
AAAAGACTGTGATGGTAAATGGACTCACCATCACTGCCAGTATTGCACTCAAGAGGGATAAGACTGGTAGGCTAATGGtcagcactgtcaactgtgtggcCAACGTGGGCAGTGCCAGCATCAAGTTCCACGGTGGGGCCAGCAGGCTGGACAATCTTTTCACGTCCTACACTGACAAGGCCTTGCATAGTGCTCAGCAGAAACAGATCTGCCCCCTAGTGGCTGATGTTATTACTGACATGAACCCACACCTCAAAACGTTCAATGATTTGGAGTCACTAAGACAAGAGGCTAGAGGTAAaacctctatcgctctctctccctttctctttccacctctctctccctcgctctctcctttcatatttttctccctccctccctccctccttccgtctgtctgtctgtctgt

Function

NR:

description
phospholipid transfer protein-like

GO:

id name namespace
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037083.1 True 412 mRNA 0.50 4 78028591 78029532

Neighbor

gene id symbol gene type direction distance location
LOC110493259 NA coding upstream 13373 78014343 ~ 78015218 (+)
LOC110494608 LOC106565727 coding upstream 257369 77552527 ~ 77771222 (+)
LOC110494607 LOC106565728 coding upstream 579890 77335285 ~ 77448701 (+)
LOC110494606 LOC106565729 coding upstream 767399 77166875 ~ 77261192 (+)
LOC110494602 LOC106565731 coding upstream 1355383 76663444 ~ 76673208 (+)
lbp/bpi-2 lbp/bpi-2 coding downstream 1955 78031487 ~ 78036695 (+)
tcbp2 tcbp2 coding downstream 21437 78050969 ~ 78053292 (+)
LOC118940495 tcbp2 coding downstream 26793 78056325 ~ 78060810 (+)
si:ch73-303b9.1 LOC106565721 coding downstream 55190 78084722 ~ 78085995 (+)
LOC110494621 LOC105017400 coding downstream 361373 78390905 ~ 78395729 (+)
G1491892 NA non-coding upstream 17804 78010586 ~ 78010787 (+)
G1491889 NA non-coding upstream 18468 78009105 ~ 78010123 (+)
G1491885 NA non-coding upstream 20338 78008029 ~ 78008253 (+)
G1491831 NA non-coding upstream 70785 77957603 ~ 77957806 (+)
G1491417 NA non-coding upstream 159676 77794792 ~ 77868915 (+)
G1491925 NA non-coding downstream 56535 78086067 ~ 78086589 (+)
G1491928 NA non-coding downstream 60647 78090179 ~ 78090496 (+)
G1491939 NA non-coding downstream 92797 78122329 ~ 78122539 (+)
G1491941 NA non-coding downstream 94694 78124226 ~ 78125219 (+)
G1491947 NA non-coding downstream 103656 78133188 ~ 78133414 (+)
G1491899 NA other upstream 8775 78018368 ~ 78019816 (+)
G1491886 NA other upstream 19792 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1344571 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 3619402 74388428 ~ 74432420 (+)
G1486811 NA other upstream 4049156 73978890 ~ 73979435 (+)
G1491963 NA other downstream 159480 78189012 ~ 78190290 (+)
G1492003 NA other downstream 223097 78252629 ~ 78253308 (+)
G1492310 NA other downstream 741215 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 1300087 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 1353113 79382417 ~ 79387551 (+)

Expression


Co-expression Network